RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 PLOD2O00469 737 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 SOCS6O14544 535 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 B3GALT2O43825 422 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 UNC5CO95185 931 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 LRATO95237 230 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 ALBP02768 609 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 FHP07954 510 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 SNRPB2P08579 225 aaKnown RBP6.34□□□□□ -1.4
LINC00517-202ENST00000554257 HOXD11P31277 338 aaPredicted RBP6.34□□□□□ -1.4
LINC00517-202ENST00000554257 CLNS1AP54105 237 aaKnown RBP6.34□□□□□ -1.4
LINC00517-202ENST00000554257 HBA1P69905 142 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 EEF1A2Q05639 463 aaKnown RBP6.34□□□□□ -1.4
LINC00517-202ENST00000554257 NKG7Q16617 165 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 DPY19L1Q2PZI1 675 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 VPS26BQ4G0F5 336 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 AGKQ53H12 422 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 OR4F3Q6IEY1 312 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 FAM180BQ6P0A1 224 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 TTLL10Q6ZVT0 673 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 SNX32Q86XE0 403 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 METTL27Q8N6F8 245 aaPredicted RBP6.34□□□□□ -1.4
LINC00517-202ENST00000554257 POU5F2Q8N7G0 328 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 SPDL1Q96EA4 605 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 NRSN2Q9GZP1 204 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 VN1R1Q9GZP7 353 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 CXorf36Q9H7Y0 433 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 ANKHQ9HCJ1 492 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 ZNF304Q9HCX3 659 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 PFDN4Q9NQP4 134 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 FAM120CQ9NX05 1096 aaKnown RBP6.34□□□□□ -1.4
LINC00517-202ENST00000554257 SLC39A1Q9NY26 324 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 CCDC167Q9P0B6 97 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 VAPAQ9P0L0 249 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 TMEM181Q9P2C4 612 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 TAGLN3Q9UI15 199 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 KLK13Q9UKR3 277 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 MAU2Q9Y6X3 613 aa6.34□□□□□ -1.4
LINC00517-202ENST00000554257 PCNX3Q9H6A9 2034 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 A0A096LPI6 279 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ARHGAP10A1A4S6 786 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 PRAMEF27A3QJZ7 478 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 TMEM200CA6NKL6 621 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 KIAA0754O94854 1291 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 DDAH2O95865 285 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 IGKV3-11P04433 115 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 NR2F6P10588 404 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 STAT5AP42229 794 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 CRYBA2P53672 197 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 FOLH1Q04609 750 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 C2orf80Q0P641 193 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 FUT5Q11128 374 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ADRM1Q16186 407 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 GTDC1Q4AE62 458 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 RUNDC3AQ59EK9 446 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 SAXO2Q658L1 398 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 OR52E8Q6IFG1 317 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 PGM2L1Q6PCE3 622 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 CEACAM20Q6UY09 585 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 TICAM1Q8IUC6 712 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ZNF595Q8IYB9 648 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 OR2L13Q8N349 312 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 WDR36Q8NI36 951 aaKnown RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ADAMTS18Q8TE60 1221 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ZFP90Q8TF47 636 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 PTPMT1Q8WUK0 201 aaPredicted RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 GFM2Q969S9 779 aaKnown RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 TMEM125Q96AQ2 219 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 RILPQ96NA2 401 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 NPAS2Q99743 824 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 CMKLR1Q99788 373 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 NLNQ9BYT8 704 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 SEMA4CQ9C0C4 833 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 FANCEQ9HB96 536 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 MKKSQ9NPJ1 570 aaPredicted RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 MRGBPQ9NV56 204 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 PCDHB14Q9Y5E9 798 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 DYTNA2CJ06 578 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 HRKO00198 91 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 MEN1O00255 615 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 MAP3K7O43318 606 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 CTNSO60931 367 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 STK17BO94768 372 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 NTRK1P04629 796 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ABCB1P08183 1280 aaPredicted RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 NCF2P19878 526 aaPredicted RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 IL10P22301 178 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 CSTF2P33240 577 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ARL1P40616 181 aaPredicted RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 CDK9P50750 372 aaKnown RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 RAP1GDS1P52306 607 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 HSD17B7P56937 341 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 SRSF11Q05519 484 aaKnown RBP6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ERV3-1Q14264 604 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 NDUFA9Q16795 377 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 FAM214AQ32MH5 1076 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 VWA2Q5GFL6 755 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 NXNQ6DKJ4 435 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ARMC10Q8N2F6 343 aa6.33□□□□□ -1.4
LINC00517-202ENST00000554257 ZNF615Q8N8J6 731 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms