RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 MSRB3Q8IXL7 192 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 SLC15A3Q8IY34 581 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 CLECL1Q8IZS7 167 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 LRRC25Q8N386 305 aaPredicted RBP7.21□□□□□ -1.26
TDP1-209ENST00000554180 FBXW8Q8N3Y1 598 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 OR4K14Q8NGD5 310 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 OR5T3Q8NGG3 340 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 OR4A15Q8NGL6 344 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 NETO1Q8TDF5 533 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 UTP4Q969X6 686 aaKnown RBP7.21□□□□□ -1.26
TDP1-209ENST00000554180 TMEM125Q96AQ2 219 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 CIDECQ96AQ7 238 aaPredicted RBP7.21□□□□□ -1.26
TDP1-209ENST00000554180 EXOSC8Q96B26 276 aaKnown RBP7.21□□□□□ -1.26
TDP1-209ENST00000554180 MOAP1Q96BY2 351 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 TBC1D20Q96BZ9 403 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 MIEF2Q96C03 454 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 CNRIP1Q96F85 164 aaPredicted RBP7.21□□□□□ -1.26
TDP1-209ENST00000554180 LRFN5Q96NI6 719 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 AMDHD1Q96NU7 426 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 DEPDC7Q96QD5 511 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 BBS4Q96RK4 519 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 CDRT15Q96T59 188 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 CSF3RQ99062 836 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 SLC39A3Q9BRY0 314 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 ZPBPQ9BS86 351 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 INPP5KQ9BT40 448 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 THTPAQ9BU02 230 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 RAD21L1Q9H4I0 556 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 NANOGQ9H9S0 305 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 IL1RL2Q9HB29 575 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 SLAMF7Q9NQ25 335 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 TOR4AQ9NXH8 423 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 SLC25A37Q9NYZ2 338 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 VAPAQ9P0L0 249 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 SLAMF8Q9P0V8 285 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 HCN3Q9P1Z3 774 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 C5AR2Q9P296 337 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.21□□□□□ -1.26
TDP1-209ENST00000554180 RRP15Q9Y3B9 282 aaKnown RBP7.21□□□□□ -1.26
TDP1-209ENST00000554180 L3MBTL1Q9Y468 752 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 NEUROG3Q9Y4Z2 214 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 PCDHB14Q9Y5E9 798 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.21□□□□□ -1.26
TDP1-209ENST00000554180 ADAMTS20P59510 1910 aa7.21□□□□□ -1.26
TDP1-209ENST00000554180 SEC16AO15027 2179 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 PTPRZ1P23471 2315 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 IGLV3-12A0A075B6K2 115 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 GLOD5A6NK44 160 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 EFCAB7A8K855 629 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 EVPLLA8MZ36 301 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ANKRD65E5RJM6 399 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 NME4O00746 187 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 POLR1CO15160 346 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 NVLO15381 856 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 CPNE3O75131 537 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 ERAL1O75616 437 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 CIB2O75838 187 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 BMP10O95393 424 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 CPSF4O95639 269 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 GPR75O95800 540 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 C6orf47O95873 294 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ATP1B1P05026 303 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ABCB1P08183 1280 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 CYC1P08574 325 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 SPTBP11277 2137 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 CPMP14384 443 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 FBLP22087 321 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 ALAS2P22557 587 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 UQCRC2P22695 453 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ME2P23368 584 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 CDKN2CP42773 168 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 XCR1P46094 333 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 XKP51811 444 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 NCBP2P52298 156 aaKnown RBP eCLIP7.2□□□□□ -1.261e-7■■■■□ 26
TDP1-209ENST00000554180 MAPK10P53779 464 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 EEFSECP57772 596 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 IGLV3-21P80748 117 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 SIM1P81133 766 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 TXNL4AP83876 142 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 NHLH1Q02575 133 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 FOLH1Q04609 750 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ABHD18Q0P651 414 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 BNIP2Q12982 314 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 FADDQ13158 208 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 GAB1Q13480 694 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 CEACAM7Q14002 265 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 CAPRIN1Q14444 709 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 PRSS53Q2L4Q9 553 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 C6orf163Q5TEZ5 329 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ARHGAP40Q5TG30 622 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 PWWP2BQ6NUJ5 590 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 BHLHB9Q6PI77 547 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 CEACAM20Q6UY09 585 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ZNF621Q6ZSS3 439 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 GPR155Q7Z3F1 870 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 TNIP2Q8NFZ5 429 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 OR51Q1Q8NH59 317 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 SUN3Q8TAQ9 357 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 SFXN5Q8TD22 340 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms