RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 HKDC1Q2TB90 917 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 FAM174BQ3ZCQ3 159 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 VPS26BQ4G0F5 336 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 TIGD2Q4W5G0 525 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 TCTE1Q5JU00 501 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 RINLQ6ZS11 566 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 RIMKLAQ8IXN7 391 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 NATD1Q8N6N6 113 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 RBM15BQ8NDT2 890 aaKnown RBP13.67□□□□□ -0.22
SHMT2-208ENST00000553868 SLC45A3Q96JT2 553 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 TEX37Q96LM6 180 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 FCRL4Q96PJ5 515 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 MMADHCQ9H3L0 296 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-208ENST00000553868 REEP4Q9H6H4 257 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 LYARQ9NX58 379 aaKnown RBP13.67□□□□□ -0.22
SHMT2-208ENST00000553868 TAS2R1Q9NYW7 299 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 SEMA5BQ9P283 1151 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 KLHL3Q9UH77 587 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 B3GALT1Q9Y5Z6 326 aa13.67□□□□□ -0.22
SHMT2-208ENST00000553868 A0A0A6YYD5 115 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 IGHV5-51A0A0C4DH38 117 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 SCAMP2O15127 329 aaKnown RBP13.66□□□□□ -0.22
SHMT2-208ENST00000553868 AKAP10O43572 662 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 KIF1CO43896 1103 aaKnown RBP13.66□□□□□ -0.22
SHMT2-208ENST00000553868 RAD1O60671 282 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 SCELO95171 688 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 LDLRP01130 860 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 PGRP06401 933 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
SHMT2-208ENST00000553868 CSF2RBP32927 897 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 KIR3DL1P43629 444 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 MTTPP55157 894 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 VSX2P58304 361 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-208ENST00000553868 TAS2R50P59544 299 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 KLC1Q07866 573 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 C2orf80Q0P641 193 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 PGS1Q32NB8 556 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 SPANXN4Q5MJ08 99 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 CPTPQ5TA50 214 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 ANXA8L1Q5VT79 327 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 FRMPD2BQ6IN97 320 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 PRMT9Q6P2P2 845 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 CAMKMTQ7Z624 323 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 UBE3DQ7Z6J8 389 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 GPR180Q86V85 440 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 PGAM4Q8N0Y7 254 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 KRTCAP2Q8N6L1 136 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 VPS37AQ8NEZ2 397 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 OR4D9Q8NGE8 314 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 PPCDCQ96CD2 204 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 EGLN2Q96KS0 407 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 OR52E6Q96RD3 313 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 SERINC2Q96SA4 455 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 NPAS2Q99743 824 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 ZNF717Q9BY31 904 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-208ENST00000553868 FANCEQ9HB96 536 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 FAM60AQ9NP50 221 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 MIEF1Q9NQG6 463 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 PRDM7Q9NQW5 492 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 FAM120CQ9NX05 1096 aaKnown RBP13.66□□□□□ -0.22
SHMT2-208ENST00000553868 ATP6V1HQ9UI12 483 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 PRPF19Q9UMS4 504 aaKnown RBP13.66□□□□□ -0.22
SHMT2-208ENST00000553868 SLC22A7Q9Y694 548 aa13.66□□□□□ -0.22
SHMT2-208ENST00000553868 LOC105369274A0A096LPK9 316 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 LOC102723532A0A0G2JNH3 316 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 LOC101059948A0A1B0GTJ6 334 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 C9JVG2 144 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 RTCAO00442 366 aaKnown RBP13.65□□□□□ -0.22
SHMT2-208ENST00000553868 FBP2O00757 339 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 B3GALT2O43825 422 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 LRATO95237 230 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 STATHP02808 62 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 GBAP04062 536 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 ANKRD34CP0C6C1 535 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 FAM58BPP0C7Q3 252 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 MSL3P1P0C860 447 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 ZNF888P0CJ79 500 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-208ENST00000553868 DRD2P14416 443 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 ALOX12P18054 663 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 ZFP36L2P47974 494 aaKnown RBP13.65□□□□□ -0.22
SHMT2-208ENST00000553868 EMP3P54852 163 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 RAB8AP61006 207 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 BTN3A2P78410 334 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 FOXM1Q08050 763 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 NFYCQ13952 458 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 MAPKAPK3Q16644 382 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 PRR30Q53SZ7 412 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-208ENST00000553868 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 GARNL3Q5VVW2 1013 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 FAM71E1Q6IPT2 247 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 TMEM214Q6NUQ4 689 aaKnown RBP13.65□□□□□ -0.22
SHMT2-208ENST00000553868 DSELQ8IZU8 1212 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 OR4N4Q8N0Y3 316 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 DPP10Q8N608 796 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 ACOT4Q8N9L9 421 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 KCT2Q8NC54 265 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 OR8J2Q8NGG1 315 aa13.65□□□□□ -0.22
SHMT2-208ENST00000553868 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHMT2-208ENST00000553868 UTP15Q8TED0 518 aaKnown RBP13.65□□□□□ -0.22
SHMT2-208ENST00000553868 KLHL6Q8WZ60 621 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms