RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GPRIN3Q6ZVF9 776 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ANKRD37Q7Z713 158 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SLC5A8Q8N695 610 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ACOT4Q8N9L9 421 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 FAM47BQ8NA70 645 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 OR52B6Q8NGF0 335 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 PPP1R14CQ8TAE6 165 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 M1APQ8TC57 530 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 METTL6Q8TCB7 284 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 THAP3Q8WTV1 239 aaPredicted RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 MZB1Q8WU39 189 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 L3HYPDHQ96EM0 354 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SMIM10Q96HG1 83 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 APOPT1Q96IL0 206 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF354BQ96LW1 612 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SMAD5Q99717 465 aaKnown RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 C1QTNF3Q9BXJ4 246 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SLC29A3Q9BZD2 475 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ILKAPQ9H0C8 392 aaPredicted RBP7.83□□□□□ -1.16
PSEN1-209ENST00000553855 KCNK13Q9HB14 408 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 PTGFRNQ9P2B2 879 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 FBXW2Q9UKT8 454 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 DAPP1Q9UN19 280 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 SLC12A4Q9UP95 1085 aa7.83□□□□□ -1.16
PSEN1-209ENST00000553855 ITPR1Q14643 2758 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 SNRNP200O75643 2136 aaKnown RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 SPTBP11277 2137 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 hCG_2014768A0A024R1R8 64 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 A0A1W2PQ72 361 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 SLC22A31A6NKX4 558 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 A8MUI8 341 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 RTCAO00442 366 aaKnown RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CTIFO43310 598 aaKnown RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PLIN3O60664 434 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CTNSO60931 367 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 OR4F21O95013 312 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 SEMA3DO95025 777 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CHEK2O96017 543 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PROCP04070 461 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PRR35P0CG20 571 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 NEFHP12036 1026 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 HSD3B1P14060 373 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 TSPAN8P19075 237 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 NR1D1P20393 614 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CASRP41180 1078 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 NEK2P51955 445 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 RHAGQ02094 409 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 SLC18A2Q05940 514 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF33BQ06732 778 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 TRAF3Q13114 568 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 RUNX2Q13950 521 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PCOLCEQ15113 449 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 IMPG1Q17R60 797 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 UNC50Q53HI1 259 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 TMEM201Q5SNT2 666 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CEP85LQ5SZL2 805 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 C6orf163Q5TEZ5 329 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 LIPMQ5VYY2 423 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PLAG1Q6DJT9 500 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 ADNP2Q6IQ32 1131 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 LINC00696Q6ZRV3 163 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 LANCL3Q6ZV70 420 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 TRABD2AQ86V40 505 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 GPR180Q86V85 440 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 TMEM132CQ8N3T6 1108 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 ZCCHC7Q8N3Z6 543 aaKnown RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CDYL2Q8N8U2 506 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 GBP7Q8N8V2 638 aaPredicted RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 DNAJB14Q8TBM8 379 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 WDR20Q8TBZ3 569 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 DAZLQ92904 295 aaKnown RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 TSLPQ969D9 159 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CNDP1Q96KN2 507 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 TMEM237Q96Q45 408 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 LMF1Q96S06 567 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF382Q96SR6 550 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PELOQ9BRX2 385 aaKnown RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 TMEM109Q9BVC6 243 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF552Q9H707 407 aaPredicted RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 BRF2Q9HAW0 419 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 EML4Q9HC35 981 aaKnown RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 ZBTB26Q9HCK0 441 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 MLXIPLQ9NP71 852 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 MID1IP1Q9NPA3 183 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PRDM7Q9NQW5 492 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PNO1Q9NRX1 252 aaKnown RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 LANCL2Q9NS86 450 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 ARGLU1Q9NWB6 273 aaPredicted RBP7.82□□□□□ -1.16
PSEN1-209ENST00000553855 MKS1Q9NXB0 559 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 LGALS13Q9UHV8 139 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 PLLPQ9Y342 182 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CLCA3PQ9Y6N3 262 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 CELSR3Q9NYQ7 3312 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 LAMA5O15230 3695 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 ANKRD12Q6UB98 2062 aa7.82□□□□□ -1.16
PSEN1-209ENST00000553855 IGHV3-20A0A0C4DH32 117 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 SAGE2PA6NJ88 616 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 A8MUA0 341 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 FAM227AF5H4B4 570 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms