RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ZBED6CLQ96FA7 236 aaPredicted RBP12.6□□□□□ -0.39
PRPF39-204ENST00000553605 ACBD3Q9H3P7 528 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 IKBKGQ9Y6K9 419 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 CTAGE9A4FU28 777 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 EIF3FO00303 357 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-204ENST00000553605 CYR61O00622 381 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 B3GALT2O43825 422 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 ETHE1O95571 254 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 C8GP07360 202 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 HIST1H2AGP0C0S8 130 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-204ENST00000553605 ETS1P14921 441 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 HIST1H2ADP20671 130 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 SERPINB3P29508 390 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 PCYT1AP49585 367 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 STXBP1P61764 594 aaKnown RBP12.59□□□□□ -0.39
PRPF39-204ENST00000553605 REEP5Q00765 189 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 TOMM20Q15388 145 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 EIPR1Q53HC9 387 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 TBCELQ5QJ74 424 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 DUPD1Q68J44 220 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 NEPROQ6NW34 567 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 BTLAQ7Z6A9 289 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 GCNT2Q8N0V5 402 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 GPATCH11Q8N954 259 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 OR56A3Q8NH54 315 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 SLC5A11Q8WWX8 675 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 GAL3ST3Q96A11 431 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 HIST1H2AHQ96KK5 128 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 GNRHR2Q96P88 292 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 FAM111AQ96PZ2 611 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 HIST1H2AJQ99878 128 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 TUBA1CQ9BQE3 449 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 H2AFJQ9BTM1 129 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 UBQLN3Q9H347 655 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 AMFRQ9UKV5 643 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 CR1P17927 2039 aa12.59□□□□□ -0.39
PRPF39-204ENST00000553605 TCRBV7S2A1N4TA0A589 114 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 ANKRD33BA6NCL7 494 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 AP3B1O00203 1094 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 MSTNO14793 375 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-204ENST00000553605 FBXO45P0C2W1 286 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 MGAT1P26572 445 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 IDUAP35475 653 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 CD79BP40259 229 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 NAGLUP54802 743 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 SERTAD2Q14140 314 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 EFTUD2Q15029 972 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRPF39-204ENST00000553605 ETFDHQ16134 617 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 LRRC8EQ6NSJ5 796 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 PLXDC2Q6UX71 529 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.4
PRPF39-204ENST00000553605 C9orf40Q8IXQ3 194 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 EEF1AKMT1Q8WVE0 214 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 ATG4AQ8WYN0 398 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 DIO2Q92813 273 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 WNT2BQ93097 391 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 UCN3Q969E3 161 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 ANKRD9Q96BM1 317 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-204ENST00000553605 ZC3HAV1LQ96H79 300 aaKnown RBP12.58□□□□□ -0.4
PRPF39-204ENST00000553605 TSNARE1Q96NA8 513 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 CSF3RQ99062 836 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 AIF1LQ9BQI0 150 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 ANGPTL4Q9BY76 406 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 LRTM1Q9HBL6 345 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 FBXO6Q9NRD1 293 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-204ENST00000553605 SYBUQ9NX95 663 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 PSD3Q9NYI0 1048 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 PCDHA13Q9Y5I0 950 aa12.58□□□□□ -0.4
PRPF39-204ENST00000553605 A0A088AWK7 358 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 ERI3O43414 337 aaKnown RBP12.57□□□□□ -0.4
PRPF39-204ENST00000553605 SPRY1O43609 319 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-204ENST00000553605 LDB3O75112 727 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 TNFSF13O75888 250 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 SMNDC1O75940 238 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRPF39-204ENST00000553605 ACTL6AO96019 429 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 TPM3P06753 285 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 TPM1P09493 284 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 CPN1P15169 458 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 ZNF10P21506 573 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-204ENST00000553605 UGT2B10P36537 528 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 MSH2P43246 934 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 LIM2P55344 173 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
PRPF39-204ENST00000553605 SP140Q13342 867 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 RCN2Q14257 317 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 ZNF470Q6ECI4 717 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 ZNF550Q7Z398 422 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 KLHDC8AQ8IYD2 350 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 MS4A6EQ96DS6 147 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 SENP5Q96HI0 755 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-204ENST00000553605 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 BEX2Q9BXY8 128 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 PELI2Q9HAT8 420 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 ARL15Q9NXU5 204 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 DAPP1Q9UN19 280 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 SOX13Q9UN79 622 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 C15orf41Q9Y2V0 281 aa12.57□□□□□ -0.4
PRPF39-204ENST00000553605 LRIT2A6NDA9 550 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms