RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 IGLV3-21P80748 117 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-206ENST00000553529 SLC29A2Q14542 456 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 TERF2Q15554 542 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 CEP112Q8N8E3 955 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 OR52N2Q8NGI0 321 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 TRPC4APQ8TEL6 797 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 MZB1Q8WU39 189 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 ITLN2Q8WWU7 325 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-206ENST00000553529 RELTQ969Z4 430 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 TMEM237Q96Q45 408 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 MYOTQ9UBF9 498 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 PCDHGB6Q9Y5F9 930 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 PCDHGA11Q9Y5H2 935 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 HRH3Q9Y5N1 445 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 DIDO1Q9BTC0 2240 aaKnown RBP16.9■□□□□ 0.3
SHMT2-206ENST00000553529 DOPEY1Q5JWR5 2465 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 FAM166BA8MTA8 275 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 STX16-NPEPL1H3BU86 382 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 STX16O14662 325 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ASNA1O43681 348 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 PEX1O43933 1283 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 DLX3O60479 287 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 OR4F21O95013 312 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 PDYNP01213 254 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 SNRPAP09012 282 aaKnown RBP16.89■□□□□ 0.29
SHMT2-206ENST00000553529 RBP1P09455 135 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 CT62P0C5K7 136 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 FAM58BPP0C7Q3 252 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ZNF24P17028 368 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 STT3AP46977 705 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 HERVK_113P63132 956 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ERVK-8P63133 956 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 DUSP2Q05923 314 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ASPHQ12797 758 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 UNC50Q53HI1 259 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ADGRD1Q6QNK2 874 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 TMEM64Q6YI46 380 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 HSDL2Q6YN16 418 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 CCDC91Q7Z6B0 441 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 TMEM132CQ8N3T6 1108 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ZCCHC7Q8N3Z6 543 aaKnown RBP16.89■□□□□ 0.29
SHMT2-206ENST00000553529 SRFBP1Q8NEF9 429 aaKnown RBP16.89■□□□□ 0.29
SHMT2-206ENST00000553529 OR14A16Q8NHC5 309 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 CNPPD1Q9BV87 410 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ERVK-6Q9BXR3 956 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ROGDIQ9GZN7 287 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 MRPL46Q9H2W6 279 aaKnown RBP16.89■□□□□ 0.29
SHMT2-206ENST00000553529 TNFRSF10DQ9UBN6 386 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 ERVK-19Q9WJR5 959 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 LIPGQ9Y5X9 500 aa16.89■□□□□ 0.29
SHMT2-206ENST00000553529 SPTBN1Q01082 2364 aaKnown RBP16.89■□□□□ 0.29
SHMT2-206ENST00000553529 MYO7BQ6PIF6 2116 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 CDC40O60508 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
SHMT2-206ENST00000553529 SMIM24O75264 130 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 NADKO95544 446 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-206ENST00000553529 IGKV3-11P04433 115 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 KLK1P06870 262 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 ABHD2P08910 425 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 CCL3P10147 92 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 PRF1P14222 555 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 SLCO1A2P46721 670 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 HTR6P50406 440 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 CMPK2Q5EBM0 449 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 FRG2Q64ET8 278 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 CEP128Q6ZU80 1094 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 IFT20Q8IY31 132 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 RPRMLQ8N4K4 120 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 MORN4Q8NDC4 146 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 PSD4Q8NDX1 1056 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 SIMC1Q8NDZ2 872 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 ASB15Q8WXK1 588 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 SENP5Q96HI0 755 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-206ENST00000553529 DGAT2Q96PD7 388 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 PHF12Q96QT6 1004 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 FRG2BQ96QU4 278 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 KCNA7Q96RP8 456 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 MRPL57Q9BQC6 102 aaKnown RBP16.88■□□□□ 0.29
SHMT2-206ENST00000553529 CCDC77Q9BR77 488 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 DDX31Q9H8H2 851 aaKnown RBP16.88■□□□□ 0.29
SHMT2-206ENST00000553529 EMCNQ9ULC0 261 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 ERVK-11Q9UQG0 969 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 TSC22D4Q9Y3Q8 395 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 TNPO3Q9Y5L0 923 aaKnown RBP16.88■□□□□ 0.29
SHMT2-206ENST00000553529 NCKAP5O14513 1909 aa16.88■□□□□ 0.29
SHMT2-206ENST00000553529 A0A1B0GTH9 108 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 SMIM23A6NLE4 172 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 A8MVJ9 347 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 UGDHO60701 494 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 CELA3AP09093 270 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 NR2F6P10588 404 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 ALOX15P16050 662 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-206ENST00000553529 PTX3P26022 381 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-206ENST00000553529 SERPINB1P30740 379 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 SSTR4P31391 388 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 HPDP32754 393 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-206ENST00000553529 DNASE1L1P49184 302 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 GALNT1Q10472 559 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-206ENST00000553529 ZNF267Q14586 743 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-206ENST00000553529 TSNAXIP1Q2TAA8 658 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 TTC19Q6DKK2 380 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms