RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ZFP36L2P47974 494 aaKnown RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 CLK1P49759 484 aaKnown RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 TKTL1P51854 596 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 TMEM50BP56557 158 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 HILS1P60008 231 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 ERVK-16P61578 105 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 PMP22Q01453 160 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 RBBP4Q09028 425 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 KNOP1Q1ED39 458 aaKnown RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 GPAT3Q53EU6 434 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 GFI1BQ5VTD9 330 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 OR6B2Q6IFH4 312 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 ADGRD2Q7Z7M1 963 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 KCNMB4Q86W47 210 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 CARM1Q86X55 608 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 OR52B6Q8NGF0 335 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 GOLGA5Q8TBA6 731 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 P3H4Q92791 437 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 MRPL38Q96DV4 380 aaKnown RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 RPGRIP1Q96KN7 1286 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 AGAP4Q96P64 663 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 KCNK13Q9HB14 408 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 GDF3Q9NR23 364 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 COPS7AQ9UBW8 275 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 ERRFI1Q9UJM3 462 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 IQCMA0A1B0GVH7 501 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 ARHGAP42A6NI28 874 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 YJEFN3A6XGL0 299 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 ZNF724A8MTY0 619 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 SNAP91O60641 907 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 STAM2O75886 525 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 ANXA9O76027 345 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 OR6A2O95222 327 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 TGFAP01135 160 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 CCDC192P0DO97 292 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 CCNA2P20248 432 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 PKLRP30613 574 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 ALDH3B1P43353 468 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 MTIF2P46199 727 aaKnown RBP4.29□□□□□ -1.72
SYNE2-210ENST00000553455 NLRP11P59045 1033 aaKnown RBP4.29□□□□□ -1.72
SYNE2-210ENST00000553455 NFATC2Q13469 925 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 LY6DQ14210 128 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 FASTKD3Q14CZ7 662 aaKnown RBP4.29□□□□□ -1.72
SYNE2-210ENST00000553455 FASTKD1Q53R41 847 aaKnown RBP4.29□□□□□ -1.72
SYNE2-210ENST00000553455 TOR1AIP1Q5JTV8 583 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 LIPJQ5W064 366 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 RTL6Q6ICC9 239 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 CDC42EP5Q6NZY7 148 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 ZCCHC12Q6PEW1 402 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 Q6ZRG5 221 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 BNIPLQ7Z465 357 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 TAF8Q7Z7C8 310 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 LRRTM1Q86UE6 522 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 KDM8Q8N371 416 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 METTL4Q8N3J2 472 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 Q8NBF4 154 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 NR4A3Q92570 626 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 SAMD8Q96LT4 415 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 NSMCE2Q96MF7 247 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 FAM111AQ96PZ2 611 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 ALKBH3Q96Q83 286 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-210ENST00000553455 LGMNQ99538 433 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 COQ7Q99807 217 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 SYT11Q9BT88 431 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 UPF3AQ9H1J1 476 aaKnown RBP4.29□□□□□ -1.72
SYNE2-210ENST00000553455 ZDHHC18Q9NUE0 388 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 NUDCQ9Y266 331 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 RNF215Q9Y6U7 377 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 FGD5Q6ZNL6 1462 aa4.29□□□□□ -1.72
SYNE2-210ENST00000553455 IGHV4-30-2A0A087WSY4 118 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 TRBV5-4A0A0C4DH59 114 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 KPNA7A9QM74 516 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 SOCS3O14543 225 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 TRAFD1O14545 582 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 CHEK1O14757 476 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 TFECO14948 347 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 ZNF749O43361 778 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 IDH3BO43837 385 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 SYNGR4O95473 234 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 MT-ATP6P00846 226 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 KRT5P13647 590 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 UGT1A4P22310 534 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 CAMLGP49069 296 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 SSTP61278 116 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 RPS27AP62979 156 aaKnown RBP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 IRX1P78414 480 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 SLC17A1Q14916 467 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 P2RY14Q15391 338 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 MRGPRG-AS1Q2M3A8 158 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 ZNF528Q3MIS6 628 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 CCDC40Q4G0X9 1142 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 TAF1BQ53T94 588 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 ZNF613Q6PF04 617 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 BHLHA9Q7RTU4 235 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 GVQW1Q8N7I0 195 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 RELL2Q8NC24 303 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 CNNM3Q8NE01 707 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 SSC4DQ8WTU2 575 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms