RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TNFRSF12AQ9NP84 129 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 NPHS2Q9NP85 383 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 SLCO1B3Q9NPD5 702 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 C14orf105Q9NVL8 296 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 C1orf109Q9NX04 203 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 P4HTMQ9NXG6 502 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 PSD3Q9NYI0 1048 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 ZNF282Q9UDV7 671 aaPredicted RBP10.71□□□□□ -0.69
TMEM116-218ENST00000552839 FBXW2Q9UKT8 454 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 EIF3LQ9Y262 564 aaKnown RBP10.71□□□□□ -0.69
TMEM116-218ENST00000552839 MRPS2Q9Y399 296 aaKnown RBP10.71□□□□□ -0.69
TMEM116-218ENST00000552839 PTRH2Q9Y3E5 179 aaKnown RBP10.71□□□□□ -0.69
TMEM116-218ENST00000552839 PTGDR2Q9Y5Y4 395 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 USH1CQ9Y6N9 552 aa10.71□□□□□ -0.69
TMEM116-218ENST00000552839 CNTRLQ7Z7A1 2325 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 ATP6AP2A0A1C7CYW4 349 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 PEX12O00623 359 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 PLPP1O14494 284 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 EDF1O60869 148 aaKnown RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 PEX11AO75192 247 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 ATP6AP2O75787 350 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 ETHE1O95571 254 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 B3GALT4O96024 378 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 IGHEP01854 428 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 KLK1P06870 262 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 HIST1H1TP22492 207 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 CPN2P22792 545 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 ITGA3P26006 1051 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 ARRB2P32121 409 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 FOLR3P41439 243 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 XCR1P46094 333 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 ARFIP1P53367 373 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 FOXL2P58012 376 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 MAT1AQ00266 395 aaKnown RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 ADPRMQ3LIE5 342 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 TUBB8Q3ZCM7 444 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 CES4AQ5XG92 561 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 FAM219BQ5XKK7 198 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 PRSS41Q7RTY9 318 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 MTERF4Q7Z6M4 381 aaKnown RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 FJX1Q86VR8 437 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 PRSS58Q8IYP2 241 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 FAR1Q8WVX9 515 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 FKBP10Q96AY3 582 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 MIEF2Q96C03 454 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 THOC1Q96FV9 657 aaKnown RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 CHMP6Q96FZ7 201 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 PEX11GQ96HA9 241 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 RILPQ96NA2 401 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 GBP5Q96PP8 586 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 WDR77Q9BQA1 342 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 SIKE1Q9BRV8 207 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 FAIM2Q9BWQ8 316 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 SORBS1Q9BX66 1292 aaKnown RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 NPLQ9BXD5 320 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 EBPLQ9BY08 206 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 C20orf27Q9GZN8 174 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 MKKSQ9NPJ1 570 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 FGFR1OP2Q9NVK5 253 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 HAO1Q9UJM8 370 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 ADAM29Q9UKF5 820 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 NXT1Q9UKK6 140 aaKnown RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 TMED5Q9Y3A6 229 aa10.7□□□□□ -0.7
TMEM116-218ENST00000552839 POLR3HQ9Y535 204 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-218ENST00000552839 SCN3AQ9NY46 2000 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 A0A0G2JND7 137 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 GOLGA8QA0A0J9YX86 632 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 SERTM1A2A2V5 107 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 GOLGA8OA6NCC3 632 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 GOLGA8NF8WBI6 632 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 CNOT3O75175 753 aaKnown RBP10.69□□□□□ -0.7
TMEM116-218ENST00000552839 GBAP04062 536 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 STSP08842 583 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 ANXA4P09525 319 aaPredicted RBP10.69□□□□□ -0.7
TMEM116-218ENST00000552839 DDX5P17844 614 aaKnown RBP10.69□□□□□ -0.7
TMEM116-218ENST00000552839 ATP5A1P25705 553 aaKnown RBP10.69□□□□□ -0.7
TMEM116-218ENST00000552839 TIA1P31483 386 aaKnown RBP eCLIP10.69□□□□□ -0.74e-7■■■■□ 23.9
TMEM116-218ENST00000552839 ALDH9A1P49189 494 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 GYS2P54840 703 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 AQP5P55064 265 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 RAB38P57729 211 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 STX1BP61266 288 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 HYAL2Q12891 473 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 SLAMF1Q13291 335 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 RPS6KA2Q15349 733 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 RNF165Q6ZSG1 346 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 TRIM46Q7Z4K8 759 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 PPP1R32Q7Z5V6 425 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 CPLX4Q7Z7G2 160 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 METTL4Q8N3J2 472 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 ACOT4Q8N9L9 421 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 FAM47BQ8NA70 645 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 OR2Y1Q8NGV0 311 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 OR51Q1Q8NH59 317 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.69□□□□□ -0.7
TMEM116-218ENST00000552839 METTL21AQ8WXB1 218 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 VPS50Q96JG6 964 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 C1orf50Q9BV19 199 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 RUBCNLQ9H714 662 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 CLK4Q9HAZ1 481 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms