RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 TCAF1Q9Y4C2 921 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CHCHD2Q9Y6H1 151 aaPredicted RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14□□□□□ -0.17
CLSTN3-216ENST00000545663 CTAGE9A4FU28 777 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 OVOL3O00110 214 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 HS3ST1O14792 307 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 IGHV4-39P01824 125 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 HPNP05981 417 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 THBDP07204 575 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 CYP4B1P13584 511 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 NPPBP16860 134 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 TCP1P17987 556 aaKnown RBP14□□□□□ -0.17
CLSTN3-216ENST00000545663 SRD5A1P18405 259 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 RPS4XP62701 263 aaKnown RBP14□□□□□ -0.17
CLSTN3-216ENST00000545663 ETFDHQ16134 617 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 TMEM249Q2WGJ8 235 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 NHSL2Q5HYW2 709 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 BICRALQ6AI39 1079 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 CYHR1Q6ZMK1 362 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 SLC35F6Q8N357 371 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 PRELID2Q8N945 189 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 FAM47BQ8NA70 645 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 MORN4Q8NDC4 146 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 GIMAP7Q8NHV1 300 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 SGPP1Q9BX95 441 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 OPN3Q9H1Y3 402 aaPredicted RBP14□□□□□ -0.17
CLSTN3-216ENST00000545663 ESRP2Q9H6T0 727 aaKnown RBP14□□□□□ -0.17
CLSTN3-216ENST00000545663 CLK4Q9HAZ1 481 aaKnown RBP14□□□□□ -0.17
CLSTN3-216ENST00000545663 TMEM160Q9NX00 188 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 LPAR3Q9UBY5 353 aa14□□□□□ -0.17
CLSTN3-216ENST00000545663 A0A096LNT2 108 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 A0A0G2JN53 185 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 A0A1W2PNV4 684 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 GOLGA8KD6RF30 607 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 GOLGA8TH3BQL2 631 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 MSTNO14793 375 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 TMCC2O75069 709 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 PGRP06401 933 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 F7P08709 466 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 GDF10P55107 478 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 HSD17B7P56937 341 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 ETF1P62495 437 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 BTN3A2P78410 334 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 SRYQ05066 204 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 RGS1Q08116 209 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 PHKG1Q16816 387 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 MPEG1Q2M385 716 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 FAM174BQ3ZCQ3 159 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 NIPAL1Q6NVV3 410 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 LINC00523Q86TU6 105 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 MEX3DQ86XN8 651 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 OR4K1Q8NGD4 311 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 OR5L2Q8NGL0 311 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 OR8K3Q8NH51 312 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 SLC2A12Q8TD20 617 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 STARD4Q96DR4 205 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 SPACA9Q96E40 222 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 QRFPRQ96P65 431 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 NAPGQ99747 312 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 TM9SF2Q99805 663 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 G6PC3Q9BUM1 346 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 UBQLN3Q9H347 655 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 L2HGDHQ9H9P8 463 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 RNF14Q9UBS8 474 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 PACSIN2Q9UNF0 486 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 DTX4Q9Y2E6 619 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 MED12LQ86YW9 2145 aa13.99□□□□□ -0.17
CLSTN3-216ENST00000545663 IGHV4-30-2A0A087WSY4 118 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 LRRC14BA6NHZ5 514 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 PSMD3O43242 534 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 ZBTB14O43829 449 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 ETHE1O95571 254 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 SOD3P08294 240 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 TNNI3P19429 210 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 CCR8P51685 355 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 CLCN7P51798 805 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 CRADDP78560 199 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 NAE1Q13564 534 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 TOMM20Q15388 145 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 FNDC7Q5VTL7 733 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 AADACL2Q6P093 401 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 VWA1Q6PCB0 445 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 UBE2R2Q712K3 238 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 OTUD6BQ8N6M0 293 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 ABHD11Q8NFV4 315 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 GABPB2Q8TAK5 448 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 AKAP1Q92667 903 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 DAZLQ92904 295 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 WNT2BQ93097 391 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 TRMT61AQ96FX7 289 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 ZFP3Q96NJ6 502 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 RUNDC3BQ96NL0 473 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 PCBD2Q9H0N5 130 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 CNIH4Q9P003 139 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 ZFP69BQ9UJL9 534 aa13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 GDF2Q9UK05 429 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-216ENST00000545663 PRKDCP78527 4128 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 TRBC2A0A5B9 178 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 C17orf105B2RV13 164 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 C16orf97H3BN30 126 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms