RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 MED26O95402 600 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 CH25HO95992 272 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 EEF1A2Q05639 463 aaKnown RBP14.3□□□□□ -0.12
USP28-214ENST00000545540 CLEC12AQ5QGZ9 265 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 OR2G6Q5TZ20 316 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 HIST2H2AA3Q6FI13 130 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 TCTN3Q6NUS6 607 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 SYT14Q8NB59 555 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 OR9Q1Q8NGQ5 310 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 PSD2Q9BQI7 771 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 LGR4Q9BXB1 951 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 PRRG3Q9BZD7 231 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 CCDC177Q9NQR7 707 aaPredicted RBP14.3□□□□□ -0.12
USP28-214ENST00000545540 CLN6Q9NWW5 311 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 TCF20Q9UGU0 1960 aaKnown RBP14.3□□□□□ -0.12
USP28-214ENST00000545540 PRRT4C9JH25 899 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 EIF3FO00303 357 aaPredicted RBP14.3□□□□□ -0.12
USP28-214ENST00000545540 ASNA1O43681 348 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 SLC28A2O43868 658 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 ERAL1O75616 437 aaKnown RBP14.3□□□□□ -0.12
USP28-214ENST00000545540 CCNKO75909 580 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 TBX6O95947 436 aaPredicted RBP14.3□□□□□ -0.12
USP28-214ENST00000545540 ZNF30P17039 623 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 MMP12P39900 470 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 BAK1Q16611 211 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 DGLUCYQ7Z3D6 616 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 CAMKK1Q8N5S9 505 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 TRNT1Q96Q11 434 aaKnown RBP14.3□□□□□ -0.12
USP28-214ENST00000545540 RC3H2Q9HBD1 1191 aaKnown RBP14.3□□□□□ -0.12
USP28-214ENST00000545540 HHATLQ9HCP6 504 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 EQTNQ9NQ60 294 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 SEMA3GQ9NS98 782 aa14.3□□□□□ -0.12
USP28-214ENST00000545540 MOSPD3O75425 235 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 CD72P21854 359 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 CBLP22681 906 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 IRS1P35568 1242 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 INSL4Q14641 139 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 ATCAYQ86WG3 371 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 MMAAQ8IVH4 418 aaKnown RBP14.29□□□□□ -0.12
USP28-214ENST00000545540 C12orf76Q8N812 135 aaPredicted RBP14.29□□□□□ -0.12
USP28-214ENST00000545540 SLC7A13Q8TCU3 470 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 OPALINQ96PE5 141 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 GPA33Q99795 319 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 POLR2J2Q9GZM3 115 aaKnown RBP14.29□□□□□ -0.12
USP28-214ENST00000545540 TP63Q9H3D4 680 aaPredicted RBP14.29□□□□□ -0.12
USP28-214ENST00000545540 OSGEPL1Q9H4B0 414 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 FBXL12Q9NXK8 326 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 ATP6V1HQ9UI12 483 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 SNX4O95219 450 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 PPIBP23284 216 aaKnown RBP14.29□□□□□ -0.12
USP28-214ENST00000545540 PNLIPRP1P54315 467 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 TUBA1BP68363 451 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 SLC39A5Q6ZMH5 540 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 TUBA1AQ71U36 451 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 C6orf120Q7Z4R8 191 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 DEPDC4Q8N2C3 294 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 OXR1Q8N573 874 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 KBTBD8Q8NFY9 601 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 OTULINQ96BN8 352 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 POLR2J3Q9H1A7 115 aaKnown RBP14.29□□□□□ -0.12
USP28-214ENST00000545540 PRAMEF27A3QJZ7 478 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 EFCAB10A6NFE3 127 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 HBQ1P09105 142 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 PLAG1Q6DJT9 500 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 REEP3Q6NUK4 255 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 METTL3Q86U44 580 aaKnown RBP14.29□□□□□ -0.12
USP28-214ENST00000545540 NECTIN4Q96NY8 510 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 TRMT61BQ9BVS5 477 aaKnown RBP14.29□□□□□ -0.12
USP28-214ENST00000545540 SEC14L3Q9UDX4 400 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 TMCC3Q9ULS5 477 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 CORO2BQ9UQ03 480 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 ANGPT4Q9Y264 503 aa14.29□□□□□ -0.12
USP28-214ENST00000545540 SLC35F4A4IF30 521 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 CCRL2O00421 344 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 SPINT1O43278 529 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 TMPRSS11DO60235 418 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 CSO75390 466 aaKnown RBP14.28□□□□□ -0.12
USP28-214ENST00000545540 AP2A2O94973 939 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 C6P13671 934 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 EPCAMP16422 314 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 CD79BP40259 229 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 KCNC3Q14003 757 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 PRAMEF14Q5SWL7 426 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 PRAMEF13Q5VWM6 474 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 ZDHHC20Q5W0Z9 365 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 C22orf42Q6IC83 251 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 ERAP2Q6P179 960 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 KIAA1958Q8N8K9 716 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 DENND6BQ8NEG7 585 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 FCGR1BQ92637 280 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 ZNF689Q96CS4 500 aaPredicted RBP14.28□□□□□ -0.12
USP28-214ENST00000545540 ZG16BQ96DA0 208 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 SLC6A18Q96N87 628 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 TM9SF2Q99805 663 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 C17orf62Q9BQA9 187 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 FTSJ1Q9UET6 329 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 MOSPD1Q9UJG1 213 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 HAT1O14929 419 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 OR1F1O43749 312 aa14.28□□□□□ -0.12
USP28-214ENST00000545540 PRKYO43930 277 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms