RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TNFSF10P50591 281 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 OLR1P78380 273 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 RBBP5Q15291 538 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 NSDHLQ15738 373 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 TBCCQ15814 346 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 BTBD16Q32M84 506 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 ADPRMQ3LIE5 342 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 GLE1Q53GS7 698 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 SFT2D3Q587I9 215 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 PAGE2BQ5JRK9 111 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 TOR1AIP1Q5JTV8 583 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 FHL5Q5TD97 284 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 ABHD17BQ5VST6 288 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 H3F3CQ6NXT2 135 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 RPUSD3Q6P087 351 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 PAPD4Q6PIY7 484 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 ISCA2Q86U28 154 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 CTAGE4Q8IX94 777 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 CENPLQ8N0S6 344 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 LGI4Q8N135 537 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 LILRA2Q8N149 483 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 CISD2Q8N5K1 135 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 SNX31Q8N9S9 440 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 NOA1Q8NC60 698 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 RHEBL1Q8TAI7 183 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 ADAMTS18Q8TE60 1221 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 HAS2Q92819 552 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 EXT2Q93063 718 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 TSLPQ969D9 159 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 MS4A6EQ96DS6 147 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 C19orf60Q96EN9 201 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 PTCD3Q96EY7 689 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 SMIM10Q96HG1 83 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 ATOH8Q96SQ7 321 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 FMO2Q99518 471 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 LPAR4Q99677 370 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 NPLQ9BXD5 320 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 AICDAQ9GZX7 198 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 ALG9Q9H6U8 611 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 MMP25Q9NPA2 562 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 NINJ2Q9NZG7 142 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 CD274Q9NZQ7 290 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 PTBP2Q9UKA9 531 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 NTNG1Q9Y2I2 539 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 TRAF6Q9Y4K3 522 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 NPFFR2Q9Y5X5 522 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 COPG1Q9Y678 874 aaKnown RBP7.2□□□□□ -1.26
SNHG1-223ENST00000545440 NAV2Q8IVL1 2488 aa7.2□□□□□ -1.26
SNHG1-223ENST00000545440 hCG_2014768A0A024R1R8 64 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 IGHV3-20A0A0C4DH32 117 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 TCRBV16S1A1N1A0A5B0 115 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 LRIT2A6NDA9 550 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 SYNDIG1LA6NDD5 238 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 OR5H15A6NDH6 313 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ANKUB1A6NFN9 424 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ANKDD1BA6NHY2 528 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 SUPT3HB4E1H0 165 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 PSMD12O00232 456 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-223ENST00000545440 E2F3O00716 465 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ERI3O43414 337 aaKnown RBP7.19□□□□□ -1.26
SNHG1-223ENST00000545440 CCNT2O60583 730 aaKnown RBP7.19□□□□□ -1.26
SNHG1-223ENST00000545440 PRAMEF4O60810 478 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 SUPT3HO75486 399 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 AGFG2O95081 481 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 CBX6O95503 412 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ALDOAP04075 364 aaKnown RBP7.19□□□□□ -1.26
SNHG1-223ENST00000545440 EPORP19235 508 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 CD22P20273 847 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ECHS1P30084 290 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 SERPINB1P30740 379 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 GDNFP39905 211 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 HNF4AP41235 474 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 GLRBP48167 497 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 SERPINB8P50452 374 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 RAB8AP61006 207 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ZNF33BQ06732 778 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 TGM3Q08188 693 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 DLG1Q12959 904 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 MRPL49Q13405 166 aaKnown RBP7.19□□□□□ -1.26
SNHG1-223ENST00000545440 TERF2Q15554 542 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 FAM83EQ2M2I3 478 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 XKR6Q5GH73 641 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 PRAMEF9Q5VWM5 478 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 KLC3Q6P597 504 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 TRIM40Q6P9F5 258 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 FAM180AQ6UWF9 173 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 CA13Q8N1Q1 262 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 SLC5A8Q8N695 610 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ST6GALNAC3Q8NDV1 305 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 OR2L5Q8NG80 312 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 M1APQ8TC57 530 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 GRHL3Q8TE85 626 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 FAR1Q8WVX9 515 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 CCT6BQ92526 530 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 UBE2E3Q969T4 207 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 FAR2Q96K12 515 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ZNF354BQ96LW1 612 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 SLX1AQ9BQ83 275 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 CD244Q9BZW8 370 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms