RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 IGDCC3Q8IVU1 814 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 PALM2Q8IXS6 379 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 LGI4Q8N135 537 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 TTC30BQ8N4P2 665 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 TRAM1L1Q8N609 369 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 ZNF527Q8NB42 609 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 OR2Y1Q8NGV0 311 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 FAM57AQ8TBR7 257 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 MZB1Q8WU39 189 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 ULK4Q96C45 1275 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 ZNF501Q96CX3 271 aaPredicted RBP6.29□□□□□ -1.4
LDHA-223ENST00000545215 ZDHHC12Q96GR4 267 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 SIGLEC10Q96LC7 697 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 FAM167BQ9BTA0 163 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 C1orf43Q9BWL3 253 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 UCK1Q9HA47 277 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 TREX1Q9NSU2 369 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 NLE1Q9NVX2 485 aaPredicted RBP6.29□□□□□ -1.4
LDHA-223ENST00000545215 SMOXQ9NWM0 555 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 SIRT5Q9NXA8 310 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 NSMCE4AQ9NXX6 385 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 EPHA6Q9UF33 1036 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 RAB21Q9UL25 225 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 NPIPA1Q9UND3 350 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 MED16Q9Y2X0 877 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 PTRH2Q9Y3E5 179 aaKnown RBP6.29□□□□□ -1.4
LDHA-223ENST00000545215 TEX264Q9Y6I9 313 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 FAM169AQ9Y6X4 670 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 GLYATL1P3A0A0U1RQE8 302 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 MYOCOSA0A1B0GUC4 107 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 CCDC151A5D8V7 595 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 QSOX1O00391 747 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 TCF21O43680 179 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 SNX2O60749 519 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 CD1AP06126 327 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 CD63P08962 238 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 RALBP11234 206 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 ACP5P13686 325 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 GYPEP15421 78 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 AMD1P17707 334 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 STX2P32856 288 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 MAGEA4P43358 317 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 MAGEA8P43361 318 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 PIK3CGP48736 1102 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 PTH2RP49190 550 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 NR1H2P55055 460 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 MRPS25P82663 173 aaKnown RBP6.28□□□□□ -1.4
LDHA-223ENST00000545215 NAB1Q13506 487 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 THOC5Q13769 683 aaKnown RBP6.28□□□□□ -1.4
LDHA-223ENST00000545215 ERCC6LQ2NKX8 1250 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 PTCHD3Q3KNS1 767 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 ANKRD20A4Q4UJ75 823 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 VAX1Q5SQQ9 334 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 FNBP1LQ5T0N5 605 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 HENMT1Q5T8I9 393 aaKnown RBP6.28□□□□□ -1.4
LDHA-223ENST00000545215 STEAP4Q687X5 459 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 FBXO42Q6P3S6 717 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 TRMT10BQ6PF06 316 aaKnown RBP6.28□□□□□ -1.4
LDHA-223ENST00000545215 KIAA0408Q6ZU52 694 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 SNX20Q7Z614 316 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 SIAH3Q8IW03 269 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 ZBED8Q8IZ13 594 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 OR4K2Q8NGD2 314 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 GSDMBQ8TAX9 411 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 STON2Q8WXE9 905 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 CDKL2Q92772 493 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 CDKN2AIPNLQ96HQ2 116 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 COX14Q96I36 57 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 VPS35Q96QK1 796 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 CCDC77Q9BR77 488 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 C12orf65Q9H3J6 166 aaKnown RBP6.28□□□□□ -1.4
LDHA-223ENST00000545215 ANKZF1Q9H8Y5 726 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 SMURF2Q9HAU4 748 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 SAYSD1Q9NPB0 183 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 IL26Q9NPH9 171 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 CHRAC1Q9NRG0 131 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 SACM1LQ9NTJ5 587 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 ARGLU1Q9NWB6 273 aaPredicted RBP6.28□□□□□ -1.4
LDHA-223ENST00000545215 SYBUQ9NX95 663 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 ETAA1Q9NY74 926 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 VPS18Q9P253 973 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 NFU1Q9UMS0 254 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 KCNK6Q9Y257 313 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 MRPS2Q9Y399 296 aaKnown RBP6.28□□□□□ -1.4
LDHA-223ENST00000545215 ARL5AQ9Y689 179 aa6.28□□□□□ -1.4
LDHA-223ENST00000545215 V9GYY5 206 aaPredicted RBP6.28□□□□□ -1.4
LDHA-223ENST00000545215 TMEM89A2RUT3 159 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 ERICH4A6NGS2 130 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 SLC9B1P1A6NJY1 282 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 AGAP14A8MT82 685 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 MYO1CO00159 1063 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 VEGFDO43915 354 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 AVILO75366 819 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 SRP72O76094 671 aaKnown RBP6.27□□□□□ -1.41
LDHA-223ENST00000545215 UMODP07911 640 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 ABHD2P08910 425 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 PIRTP0C851 137 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 SLC2A4P14672 509 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 PAX1P15863 534 aa6.27□□□□□ -1.41
LDHA-223ENST00000545215 ALOX15P16050 662 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms