RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 PCDH1Q08174 1060 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 ASPHQ12797 758 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 GRTP1Q5TC63 336 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 KHDRBS2Q5VWX1 349 aaKnown RBP13.05□□□□□ -0.32
DDX11-228ENST00000545115 ZNF585AQ6P3V2 769 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 C3orf62Q6ZUJ4 267 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 TRILQ7L0X0 811 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 CTAGE3PQ8IX95 158 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 C9orf40Q8IXQ3 194 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 OR7G3Q8NG95 312 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 SLC22A8Q8TCC7 542 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 UBTD2Q8WUN7 234 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 SARAFQ96BY9 339 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 RBM18Q96H35 190 aaKnown RBP13.05□□□□□ -0.32
DDX11-228ENST00000545115 ART5Q96L15 291 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 CENPKQ9BS16 269 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 ERP44Q9BS26 406 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 TTYH2Q9BSA4 534 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 LDAHQ9H6V9 325 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 SLC24A3Q9HC58 644 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 TUBA8Q9NY65 449 aaPredicted RBP13.05□□□□□ -0.32
DDX11-228ENST00000545115 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 TNFRSF10DQ9UBN6 386 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 KCNN3Q9UGI6 736 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 ADGRE2Q9UHX3 823 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 FAM215AQ9Y5M1 114 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 ANKRD17O75179 2603 aaKnown RBP13.05□□□□□ -0.32
DDX11-228ENST00000545115 HCFC1P51610 2035 aa13.05□□□□□ -0.32
DDX11-228ENST00000545115 PHF3Q92576 2039 aaKnown RBP13.05□□□□□ -0.32
DDX11-228ENST00000545115 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
DDX11-228ENST00000545115 ATP6AP2A0A1C7CYW4 349 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 FAM187AA6NFU0 413 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SUPT3HB4E1H0 165 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 K7EPI3 171 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SAP18O00422 153 aaKnown RBP13.04□□□□□ -0.32
DDX11-228ENST00000545115 KERAO60938 352 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 WDR1O75083 606 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SUPT3HO75486 399 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 ATP6AP2O75787 350 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 C1QAP02745 245 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 IGKV3-11P04433 115 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 CELA3AP09093 270 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SLC35E2BP0CK96 405 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 ZFP36L2P47974 494 aaKnown RBP13.04□□□□□ -0.32
DDX11-228ENST00000545115 MAN2A2P49641 1150 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 RAP1GDS1P52306 607 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
DDX11-228ENST00000545115 BIKQ13323 160 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SLC10A1Q14973 349 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SLMAPQ14BN4 828 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 KBTBD12Q3ZCT8 623 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 PIGGQ5H8A4 983 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 DEPDC1Q5TB30 811 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 CES4AQ5XG92 561 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SLC22A10Q63ZE4 541 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 OR4C11Q6IEV9 310 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 GRHL2Q6ISB3 625 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 RAPH1Q70E73 1250 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 CMC1Q7Z7K0 106 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 TBC1D1Q86TI0 1168 aaPredicted RBP13.04□□□□□ -0.32
DDX11-228ENST00000545115 ISCA2Q86U28 154 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 TMEM200AQ86VY9 491 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 OR4N5Q8IXE1 308 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 CLYBLQ8N0X4 340 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SENP5Q96HI0 755 aaPredicted RBP13.04□□□□□ -0.32
DDX11-228ENST00000545115 ATOH8Q96SQ7 321 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 ZNF559Q9BR84 538 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 OR51B5Q9H339 312 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 RPF2Q9H7B2 306 aaKnown RBP13.04□□□□□ -0.32
DDX11-228ENST00000545115 GRPEL1Q9HAV7 217 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 NMRAL1Q9HBL8 299 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX11-228ENST00000545115 PHF11Q9UIL8 331 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 ACAD8Q9UKU7 415 aa13.04□□□□□ -0.32
DDX11-228ENST00000545115 CELSR1Q9NYQ6 3014 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 UBXN8O00124 270 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 KLK8O60259 260 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 HCN1O60741 890 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 LTA4HP09960 611 aaKnown RBP13.03□□□□□ -0.32
DDX11-228ENST00000545115 GLI4P10075 376 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 EPB42P16452 691 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 TLX1P31314 330 aaPredicted RBP13.03□□□□□ -0.32
DDX11-228ENST00000545115 GMPRP36959 345 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 PIGAP37287 484 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 BUD31P41223 144 aaPredicted RBP13.03□□□□□ -0.32
DDX11-228ENST00000545115 PIK3CBP42338 1070 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 GPX6P59796 221 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 KCNJ2P63252 427 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 TNFRSF17Q02223 184 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 FOLH1Q04609 750 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 DLG1Q12959 904 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 SLAMF1Q13291 335 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 DDX39BQ13838 428 aaKnown RBP13.03□□□□□ -0.32
DDX11-228ENST00000545115 ZNF791Q3KP31 576 aaPredicted RBP13.03□□□□□ -0.32
DDX11-228ENST00000545115 WLSQ5T9L3 541 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 RTL6Q6ICC9 239 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 MAATS1Q7Z4T9 603 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 GPR180Q86V85 440 aa13.03□□□□□ -0.32
DDX11-228ENST00000545115 DND1Q8IYX4 353 aaKnown RBP13.03□□□□□ -0.32
DDX11-228ENST00000545115 ZCCHC7Q8N3Z6 543 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms