RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 PRSS57Q6UWY2 283 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 SLCO4C1Q6ZQN7 724 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 CAPN12Q6ZSI9 719 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 SEM1Q6ZVN7 128 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 FRA10AC1Q70Z53 315 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 ADAMTSL2Q86TH1 951 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 CTAGE6Q86UF2 777 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 SPNS2Q8IVW8 549 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 PPIL6Q8IXY8 311 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 RASGEF1CQ8N431 466 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 TMEM52Q8NDY8 209 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 SIMC1Q8NDZ2 872 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 TNIP2Q8NFZ5 429 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 TRIM58Q8NG06 486 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 SMPDL3BQ92485 455 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 PIGTQ969N2 578 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 ISL2Q96A47 359 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 MAGOHBQ96A72 148 aaKnown RBP8.23□□□□□ -1.09
UBC-211ENST00000542416 NTNG2Q96CW9 530 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 SENP5Q96HI0 755 aaPredicted RBP8.23□□□□□ -1.09
UBC-211ENST00000542416 JSRP1Q96MG2 331 aaPredicted RBP8.23□□□□□ -1.09
UBC-211ENST00000542416 NAP1L3Q99457 506 aaPredicted RBP8.23□□□□□ -1.09
UBC-211ENST00000542416 PIP5K1AQ99755 562 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 SMR3AQ99954 134 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 TBCDQ9BTW9 1192 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 DOHHQ9BU89 302 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 BDH2Q9BUT1 245 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 AICDAQ9GZX7 198 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 CNOT10Q9H9A5 744 aaKnown RBP8.23□□□□□ -1.09
UBC-211ENST00000542416 CALHM2Q9HA72 323 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 SEMA4BQ9NPR2 832 aaPredicted RBP8.23□□□□□ -1.09
UBC-211ENST00000542416 MS4A12Q9NXJ0 267 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 OARD1Q9Y530 152 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 IKBKGQ9Y6K9 419 aa8.23□□□□□ -1.09
UBC-211ENST00000542416 PHF3Q92576 2039 aaKnown RBP8.23□□□□□ -1.09
UBC-211ENST00000542416 HIVEP2P31629 2446 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 IQANK1A0A1B0GTG1 560 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 GOLGA6L6A8MZA4 724 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 EEF1E1-BLOC1S5C9J1V9 151 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 TP53I11O14683 189 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 CLGNO14967 610 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 EEF1E1O43324 174 aaKnown RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 CDH16O75309 829 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 WDR47O94967 919 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 SNX4O95219 450 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 HRGP04196 525 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 FBXO45P0C2W1 286 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 RFPL3SP0C7P2 107 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 ZNF37AP17032 561 aaPredicted RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 GDF1P27539 372 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 CERS1P27544 350 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 TLX1P31314 330 aaPredicted RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 GCKP35557 465 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 MSH2P43246 934 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 STT3AP46977 705 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 ZNF136P52737 540 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 RPP38P78345 283 aaKnown RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 PPP2R2BQ00005 443 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 PLIN5Q00G26 463 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 DUSP8Q13202 625 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 LAPTM5Q13571 262 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 RCAN2Q14206 197 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 HIST2H2ACQ16777 129 aaPredicted RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 TMEM35AQ53FP2 167 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 PAGE2BQ5JRK9 111 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 PRAMEF20Q5VT98 475 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 HIST2H2AA3Q6FI13 130 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 SYDE1Q6ZW31 735 aaPredicted RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 SLC29A4Q7RTT9 530 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 TAGAPQ8N103 731 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 TCAIMQ8N3R3 496 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 NAT8LQ8N9F0 302 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 NAXEQ8NCW5 288 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 LRRN4CLQ8ND94 238 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 FAM13CQ8NE31 585 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 LINC01560Q8TB33 94 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 ZNF721Q8TF20 911 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 GRK7Q8WTQ7 553 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 CERS2Q96G23 380 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 VPS39Q96JC1 886 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 COX4I2Q96KJ9 171 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 CAPZA3Q96KX2 299 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 ZNF597Q96LX8 424 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 ZFP3Q96NJ6 502 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 DGAT2Q96PD7 388 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 SECISBP2Q96T21 854 aaKnown RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 CSF3RQ99062 836 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 TIMP4Q99727 224 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 PELOQ9BRX2 385 aaKnown RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 EFCAB11Q9BUY7 163 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 PRDM14Q9GZV8 571 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 SLC6A15Q9H2J7 730 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 ACBD3Q9H3P7 528 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 PPANQ9NQ55 473 aaKnown RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 NDRG3Q9UGV2 375 aa8.22□□□□□ -1.09
UBC-211ENST00000542416 EIF3LQ9Y262 564 aaKnown RBP8.22□□□□□ -1.09
UBC-211ENST00000542416 MBD3L4A6NDZ8 208 aaPredicted RBP8.21□□□□□ -1.1
UBC-211ENST00000542416 MBD3L3A6NE82 208 aaPredicted RBP8.21□□□□□ -1.1
UBC-211ENST00000542416 MBD3L5A6NJ08 208 aaPredicted RBP8.21□□□□□ -1.1
UBC-211ENST00000542416 LRRC3CA6NJW4 275 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms