RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 PIM3Q86V86 326 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 NRROSQ86YC3 692 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 SFTPA2Q8IWL1 248 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 ARL14Q8N4G2 192 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 PQLC3Q8N755 202 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 CCL4L1Q8NHW4 92 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 ARRDC2Q8TBH0 407 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 ZNF564Q8TBZ8 553 aaPredicted RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 PDCD6IPQ8WUM4 868 aaKnown RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 ERGIC1Q969X5 290 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 NAF1Q96HR8 494 aaKnown RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 ZNF670Q9BS34 389 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 POLR1EQ9GZS1 481 aaKnown RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 LRRN3Q9H3W5 708 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 PLAC1Q9HBJ0 212 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 NT5MQ9NPB1 228 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 PHPT1Q9NRX4 125 aaPredicted RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 CYSLTR2Q9NS75 346 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 IFNKQ9P0W0 207 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 UVRAGQ9P2Y5 699 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 SLC17A4Q9Y2C5 497 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 RNF215Q9Y6U7 377 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 RP1L1Q8IWN7 2480 aaPredicted RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 A0A0J9YYE9 177 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 FAM237BA0A1B0GVD1 139 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 EIF4E1BA6NMX2 242 aaKnown RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 KDM4EB2RXH2 506 aaPredicted RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 B4DGG1 531 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 GOLGA6L19H0YKK7 550 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 H3BNX3 289 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 TNFRSF13BO14836 293 aaPredicted RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 TNFSF15O95150 251 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 MLYCDO95822 493 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 TRBC1P01850 177 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 IVLP07476 585 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 CCNB1P14635 433 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 PSMA4P25789 261 aaKnown RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 CDAP32320 146 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 UGT1A5P35504 534 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 TAS2R40P59535 323 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 ZP1P60852 638 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 GBE1Q04446 702 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 ZFP36L1Q07352 338 aaKnown RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 NR1D2Q14995 579 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 PDK2Q15119 407 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 HADHQ16836 314 aaKnown RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 ZSCAN23Q3MJ62 389 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 C14orf28Q4W4Y0 310 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 ANKRD20A8PQ5CZ79 823 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 SGO1Q5FBB7 561 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 LRRC66Q68CR7 880 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 QSOX2Q6ZRP7 698 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 TMEM163Q8TC26 289 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 KIAA1524Q8TCG1 905 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 CREB3L4Q8TEY5 395 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 TSGA13Q96PP4 275 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 SMIM14Q96QK8 99 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 LYSMD1Q96S90 227 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 SEMA3CQ99985 751 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 TDRD1Q9BXT4 1180 aaKnown RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 XPO4Q9C0E2 1151 aaKnown RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 STRADBQ9C0K7 418 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 MUC13Q9H3R2 512 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 DPEP2Q9H4A9 486 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 SYNDIG1Q9H7V2 258 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 CLK4Q9HAZ1 481 aaKnown RBP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 MAGEE1Q9HCI5 957 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 EPB41L5Q9HCM4 733 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 SMYD2Q9NRG4 433 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 TAAR2Q9P1P5 351 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 AMACRQ9UHK6 382 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 LCMT1Q9UIC8 334 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 ADAM18Q9Y3Q7 739 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.79□□□□□ -1.16
MRPS35-204ENST00000542199 LRP4O75096 1905 aa7.79□□□□□ -1.16
MRPS35-204ENST00000542199 A0A0U1RQS6 177 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 RPS10-NUDT3A0A1W2PQS6 291 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 USP17L23D6RBM5 183 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 MS4A18H0YCH9 400 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 DOK2O60496 412 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 PTP4A3O75365 173 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 CCNDBP1O95273 360 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 TOMM40O96008 361 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 PRB1P04280 392 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 FGF1P05230 155 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 HLA-DQB2P05538 268 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 TPM3P06753 285 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 KRT7P08729 469 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 H2AFZP0C0S5 128 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 KRT10P13645 584 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 ZNF30P17039 623 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 AGAP20933 346 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 CCNCP24863 283 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 SSR1P43307 286 aaKnown RBP7.78□□□□□ -1.16
MRPS35-204ENST00000542199 GNPDA1P46926 289 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 STC1P52823 247 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 RPL26P61254 145 aaKnown RBP7.78□□□□□ -1.16
MRPS35-204ENST00000542199 NIPAL4Q0D2K0 466 aa7.78□□□□□ -1.16
MRPS35-204ENST00000542199 ILF3Q12906 894 aaKnown RBP eCLIP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms