RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CRISP1P54107 249 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 SCN1BQ07699 218 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 ELAVL3Q14576 367 aaKnown RBP15.37■□□□□ 0.05
VARS2-212ENST00000542001 MAD2L1BPQ15013 274 aaPredicted RBP15.37■□□□□ 0.05
VARS2-212ENST00000542001 ADGRD2Q7Z7M1 963 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 TMEFF1Q8IYR6 380 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 RDH12Q96NR8 316 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 RNF167Q9H6Y7 350 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 GORASP2Q9H8Y8 452 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 NMNAT1Q9HAN9 279 aaPredicted RBP15.37■□□□□ 0.05
VARS2-212ENST00000542001 CFL2Q9Y281 166 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 CARD8Q9Y2G2 431 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 FAM86C2PA6NEL3 165 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 NDUFB5O43674 189 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 SSNA1O43805 119 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 GSTM4Q03013 218 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 FIGNL1Q6PIW4 674 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 TSPYL5Q86VY4 417 aaPredicted RBP15.37■□□□□ 0.05
VARS2-212ENST00000542001 P2RY12Q9H244 342 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 UCKL1Q9NWZ5 548 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 SARDHQ9UL12 918 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 PHF24Q9UPV7 400 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 COLEC10Q9Y6Z7 277 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 QSER1Q2KHR3 1735 aa15.37■□□□□ 0.05
VARS2-212ENST00000542001 DAPL1A0PJW8 107 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 NUAK1O60285 661 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 CA5AP35218 305 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 METAP1P53582 386 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 CLDN2P57739 230 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 ACVR1Q04771 509 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 IRF5Q13568 498 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 SYPL1Q16563 259 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 CTU2Q2VPK5 515 aaKnown RBP15.36■□□□□ 0.05
VARS2-212ENST00000542001 MZT2BQ6NZ67 158 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 FAM92BQ6ZTR7 304 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 CCDC80Q76M96 950 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 FCGR1BQ92637 280 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 MCHR1Q99705 422 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 WACQ9BTA9 647 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 WDR45Q9Y484 360 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 GPC6Q9Y625 555 aaPredicted RBP15.36■□□□□ 0.05
VARS2-212ENST00000542001 CENPFP49454 3210 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 NPIPA5A0A0B4J1W7 369 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 NPIPA7E9PJI5 369 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 WWP2O00308 870 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 CTDSP2O14595 271 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 KAT7O95251 611 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 HPRP00739 348 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 NPIPA8P0DM63 369 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 IFI30P13284 250 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 IL1RNP18510 177 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 MYL9P24844 172 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 KHKP50053 298 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 FCRLBQ6BAA4 426 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 GTF2IRD2BQ6EKJ0 949 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 HTR3DQ70Z44 454 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 GTF2IRD2Q86UP8 949 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 GOLM1Q8NBJ4 401 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 SRFBP1Q8NEF9 429 aaKnown RBP15.36■□□□□ 0.05
VARS2-212ENST00000542001 SNX33Q8WV41 574 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 DNMT3BQ9UBC3 853 aaKnown RBP15.36■□□□□ 0.05
VARS2-212ENST00000542001 B4DGG1 531 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 RPP14O95059 124 aaKnown RBP15.36■□□□□ 0.05
VARS2-212ENST00000542001 MYOGP15173 224 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 CST5P28325 142 aaPredicted RBP15.36■□□□□ 0.05
VARS2-212ENST00000542001 RORCP51449 518 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 SELENOWP63302 87 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 MVKQ03426 396 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 SLC14A1Q13336 389 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 DEFB110Q30KQ9 67 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 NDUFAF5Q5TEU4 345 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 CCBE1Q6UXH8 406 aaPredicted RBP15.36■□□□□ 0.05
VARS2-212ENST00000542001 OR4K5Q8NGD3 323 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 DSN1Q9H410 356 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 ZNF385DQ9H6B1 395 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 STON1Q9Y6Q2 735 aa15.36■□□□□ 0.05
VARS2-212ENST00000542001 URADA6NGE7 173 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 J3QLW9 94 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 KCNK5O95279 499 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 ZNF19P17023 458 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 AK4P27144 223 aaPredicted RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 IRS1P35568 1242 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 SUOXP51687 545 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 STXBP1P61764 594 aaKnown RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 SLC14A2Q15849 920 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 ZNF791Q3KP31 576 aaPredicted RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 GALNT7Q86SF2 657 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 CBARPQ8N350 705 aaPredicted RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 TBC1D15Q8TC07 691 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 ZNF300Q96RE9 604 aaPredicted RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 TMEM27Q9HBJ8 222 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 RLIMQ9NVW2 624 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 MBD1Q9UIS9 605 aaPredicted RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 MED16Q9Y2X0 877 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 C7P10643 843 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 APOFQ13790 326 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 PTGES3Q15185 160 aaKnown RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 SPHARQ15513 63 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 ZNF750Q32MQ0 723 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 GRHL2Q6ISB3 625 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms