RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 MRPL57Q9BQC6 102 aaKnown RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CAPS2Q9BXY5 557 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 NT5DC2Q9H857 520 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CNOT10Q9H9A5 744 aaKnown RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF304Q9HCX3 659 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CPSF2Q9P2I0 782 aaKnown RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 PSMC3IPQ9P2W1 217 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CTSFQ9UBX1 484 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZFP69BQ9UJL9 534 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 C3orf18Q9UK00 162 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 GPC6Q9Y625 555 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CUBNO60494 3623 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 SCN3AQ9NY46 2000 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ANK2Q01484 3957 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 IGHV1-45A0A0A0MS14 117 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 A0A0A6YYC8 382 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 TLDC2A0PJX2 215 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 SMIM23A6NLE4 172 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 SYCE1LA8MT33 242 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 I3L1I5 382 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 K7EPI3 171 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PPP6CO00743 305 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 TXNDC9O14530 226 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 FFAR3O14843 346 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 CLGNO14967 610 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 SMAD7O15105 426 aaKnown RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 GPR42O15529 346 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 H2AFYO75367 372 aaKnown RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 B3GALT4O96024 378 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 S100BP04271 92 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 THBS1P07996 1170 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZGLP1P0C6A0 271 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 ITGAMP11215 1152 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 GFAPP14136 432 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 AHRP35869 848 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PMPCAQ10713 525 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 CHIT1Q13231 466 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PWP1Q13610 501 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 TBCCQ15814 346 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PDK4Q16654 411 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 SYT16Q17RD7 645 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 TBCELQ5QJ74 424 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PRMT9Q6P2P2 845 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 LRRC70Q7Z2Q7 622 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PDSS2Q86YH6 399 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 P3H2Q8IVL5 708 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 AFAP1L2Q8N4X5 818 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 MREGQ8N565 214 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 TEX9Q8N6V9 391 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 HORMAD2Q8N7B1 307 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PTGR2Q8N8N7 351 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 AMER3Q8N944 861 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 SNX31Q8N9S9 440 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 CAMKVQ8NCB2 501 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 MDS2Q8NDY4 140 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 OR9A4Q8NGU2 314 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 NT5CQ8TCD5 201 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 STT3BQ8TCJ2 826 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 FAM222BQ8WU58 562 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 SCYL1Q96KG9 808 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF354BQ96LW1 612 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 AIF1LQ9BQI0 150 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 MESP1Q9BRJ9 268 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 MRPL46Q9H2W6 279 aaKnown RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 C12orf65Q9H3J6 166 aaKnown RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 EHD1Q9H4M9 534 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 KLHL31Q9H511 634 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PLEKHF2Q9H8W4 249 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 PPCSQ9HAB8 311 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZBTB26Q9HCK0 441 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 RRAGDQ9NQL2 400 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 KLHL1Q9NR64 748 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 CRIM1Q9NZV1 1036 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 XPR1Q9UBH6 696 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 OPTCQ9UBM4 332 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 DCDC2Q9UHG0 476 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 EMCNQ9ULC0 261 aa8.26□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZANQ9Y493 2812 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 IGLV3-12A0A075B6K2 115 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 A8MT66 165 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 C4orf51C9J302 202 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 STX16-NPEPL1H3BU86 382 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 OR7A17O14581 309 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 STX16O14662 325 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 NDUFS4O43181 175 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 DLX3O60479 287 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 CDH16O75309 829 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 GOSR1O95249 250 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 EPB42P16452 691 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF24P17028 368 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 BMP7P18075 431 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 IL1RNP18510 177 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 KRT15P19012 456 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 CD53P19397 219 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZFP36L2P47974 494 aaKnown RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 EFNA3P52797 238 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 MAT1AQ00266 395 aaKnown RBP8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 IRF8Q02556 426 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 SLC18A2Q05940 514 aa8.25□□□□□ -1.09
TRAPPC1-202ENST00000540486 RUNX1T1Q06455 604 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms