RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 HCRTR1O43613 425 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 FABP3P05413 133 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 CDH3P22223 829 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 VSX2P58304 361 aaPredicted RBP21.21■□□□□ 0.99
HOMER3-204ENST00000539827 HNRNPKP61978 463 aaKnown RBP eCLIP21.21■□□□□ 0.997e-10■■■□□ 18.2
HOMER3-204ENST00000539827 OLR1P78380 273 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 VLDLRP98155 873 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 ZFP28Q8NHY6 868 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 PSMA8Q8TAA3 256 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 TFAP2CQ92754 450 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 SERINC2Q96SA4 455 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 ROGDIQ9GZN7 287 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 SEMA6CQ9H3T2 930 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 FAM60AQ9NP50 221 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 IL1RAPQ9NPH3 570 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 STARD5Q9NSY2 213 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 ZNF860A6NHJ4 632 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 NR2F6P10588 404 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 HOXB6P17509 224 aaKnown RBP21.21■□□□□ 0.99
HOMER3-204ENST00000539827 CPN2P22792 545 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 C21orf59P57076 290 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 TXNL4AP83876 142 aaKnown RBP21.21■□□□□ 0.99
HOMER3-204ENST00000539827 RELAQ04206 551 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 MERTKQ12866 999 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 DAG1Q14118 895 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 DEFB110Q30KQ9 67 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 ANKRD34AQ69YU3 496 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 ZDHHC13Q8IUH4 622 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 SUN3Q8TAQ9 357 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 KLHL6Q8WZ60 621 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 DNASE2BQ8WZ79 361 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 RAB8BQ92930 207 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 SLC38A3Q99624 504 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 ADI1Q9BV57 179 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 TMEM74BQ9NUR3 256 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 SMPD3Q9NY59 655 aaPredicted RBP21.21■□□□□ 0.99
HOMER3-204ENST00000539827 U3KQV3 271 aa21.21■□□□□ 0.99
HOMER3-204ENST00000539827 M0QX08 132 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 E2F6O75461 281 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 CSNK2A2P19784 350 aaPredicted RBP21.2■□□□□ 0.98
HOMER3-204ENST00000539827 FASLGP48023 281 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 PPM1FP49593 454 aaPredicted RBP21.2■□□□□ 0.98
HOMER3-204ENST00000539827 ARSFP54793 590 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 ABHD13Q7L211 337 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 PRSS41Q7RTY9 318 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 CARM1Q86X55 608 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 OR5K1Q8NHB7 308 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 CYGBQ8WWM9 190 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 TAMM41Q96BW9 452 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 SDCCAG3Q96C92 435 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 SERHL2Q9H4I8 314 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 SMURF2Q9HAU4 748 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 KCMF1Q9P0J7 381 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 ANGPT4Q9Y264 503 aa21.2■□□□□ 0.98
HOMER3-204ENST00000539827 VILLO15195 856 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 B3GALT2O43825 422 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SNAP29O95721 258 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 PDGFBP01127 241 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 PROS1P07225 676 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 ALOX12P18054 663 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 KCNJ10P78508 379 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 MYBPC1Q00872 1141 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 CCDC80Q76M96 950 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SLC44A2Q8IWA5 706 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 CSNK1A1LQ8N752 337 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SLC35G5Q96KT7 338 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 CSF3RQ99062 836 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 DOHHQ9BU89 302 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SOX17Q9H6I2 414 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 ZCCHC3Q9NUD5 404 aaKnown RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 GIMAP4Q9NUV9 329 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SPAG17Q6Q759 2223 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SLC9B1P1A6NJY1 282 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 BCAT2O15382 392 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 CTSBP07858 339 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 NELFEP18615 380 aaKnown RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 DCTP40126 519 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 ALDH3A2P51648 485 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 PRKAG1P54619 331 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 LIM2P55344 173 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SELENOWP63302 87 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 TNFRSF17Q02223 184 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 ZIK1Q3SY52 487 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 RPS26P11Q5JNZ5 115 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SHISA5Q8N114 240 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 SVOPLQ8N434 492 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 CCDC3Q9BQI4 270 aa21.19■□□□□ 0.98
HOMER3-204ENST00000539827 DUSP15Q9H1R2 295 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-204ENST00000539827 LMO7DNF2Z398 122 aa21.18■□□□□ 0.98
HOMER3-204ENST00000539827 PIAS2O75928 621 aa21.18■□□□□ 0.98
HOMER3-204ENST00000539827 TNFRSF1BP20333 461 aa21.18■□□□□ 0.98
HOMER3-204ENST00000539827 PRKACGP22612 351 aa21.18■□□□□ 0.98
HOMER3-204ENST00000539827 BUD31P41223 144 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-204ENST00000539827 FNTBP49356 437 aa21.18■□□□□ 0.98
HOMER3-204ENST00000539827 GPR19Q15760 415 aa21.18■□□□□ 0.98
HOMER3-204ENST00000539827 WDR45BQ5MNZ6 344 aa21.18■□□□□ 0.98
HOMER3-204ENST00000539827 OR2T5Q6IEZ7 315 aa21.18■□□□□ 0.98
HOMER3-204ENST00000539827 ZNF655Q8N720 491 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-204ENST00000539827 C19orf47Q8N9M1 422 aaKnown RBP21.18■□□□□ 0.98
HOMER3-204ENST00000539827 AVL9Q8NBF6 648 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms