RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 NSUN5Q96P11 429 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ZNF717Q9BY31 904 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF1A-212ENST00000539372 DEPPQ9NTK1 212 aa17.69■□□□□ 0.42
TNFRSF1A-212ENST00000539372 MS4A12Q9NXJ0 267 aa17.69■□□□□ 0.42
TNFRSF1A-212ENST00000539372 COPS7AQ9UBW8 275 aa17.69■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PHF11Q9UIL8 331 aa17.69■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ENTPD4Q9Y227 616 aa17.69■□□□□ 0.42
TNFRSF1A-212ENST00000539372 TEX15Q9BXT5 2789 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 A0A0A6YYD5 115 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 GLOD5A6NK44 160 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 WASHC1A8K0Z3 465 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 G3V3Y1 287 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 TMPRSS11DO60235 418 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 KRT38O76015 456 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CLDN9O95484 217 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 TUBB4AP04350 444 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 TLX1P31314 330 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 BSGP35613 385 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CCNG1P51959 295 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 IGLV3-21P80748 117 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ART3Q13508 389 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ZNF750Q32MQ0 723 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 METTL2BQ6P1Q9 378 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CYP20A1Q6UW02 462 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 C3P1Q6ZMU1 363 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 GPALPP1Q8IXQ4 340 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 SLC34A3Q8N130 599 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 AGAP11Q8TF27 550 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 TANKQ92844 425 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 MARVELD3Q96A59 401 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 MEMO1Q9Y316 297 aa17.68■□□□□ 0.42
TNFRSF1A-212ENST00000539372 A0A087WUV0 522 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 A0A0G2JMM0 328 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 A0A1W2PPB8 328 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 A0A1W2PR48 441 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 A0A1W2PRS3 328 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PINLYPA6NC86 204 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 KIR3DP1A8MWS1 328 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 HRKO00198 91 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PROM1O43490 865 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ZNF354AO60765 605 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 SMIM24O75264 130 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 GBAP04062 536 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 BUD31P41223 144 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PLIN5Q00G26 463 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CUL3Q13618 768 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 TSNAXIP1Q2TAA8 658 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CRYBG3Q68DQ2 2970 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 RPS27LQ71UM5 84 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ZFP62Q8NB50 900 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 OR52N2Q8NGI0 321 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 OR5L2Q8NGL0 311 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 OR8K3Q8NH51 312 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 C16orf52Q8NHV5 167 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 UCN3Q969E3 161 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 RBM18Q96H35 190 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 SENP5Q96HI0 755 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PHF12Q96QT6 1004 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 DDX31Q9H8H2 851 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 LYARQ9NX58 379 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ZNF180Q9UJW8 692 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PCTPQ9UKL6 214 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 TMCO1Q9UM00 188 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 NFU1Q9UMS0 254 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ASB4Q9Y574 426 aa17.67■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CENPEQ02224 2701 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CELSR2Q9HCU4 2923 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 A0A1B0GTH9 108 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 STX16-NPEPL1H3BU86 382 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 FOXE1O00358 373 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 STX16O14662 325 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 HNRNPRO43390 633 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PDE9AO76083 593 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 FAM58BPP0C7Q3 252 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 NR2F6P10588 404 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 COL6A2P12110 1019 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ALOX15P16050 662 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 HTR1EP28566 365 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ARFIP1P53367 373 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PLGLB1Q02325 96 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CMPK2Q5EBM0 449 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 TTC19Q6DKK2 380 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 MRM1Q6IN84 353 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 BNC2Q6ZN30 1099 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 DOLPP1Q86YN1 238 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CNPPD1Q9BV87 410 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 ZBTB26Q9HCK0 441 aa17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 SEMA4BQ9NPR2 832 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 KLF2Q9Y5W3 355 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-212ENST00000539372 EXOC1LA0A1B0GW35 172 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 FAM166BA8MTA8 275 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PRRG2O14669 202 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 DYRK3O43781 588 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 OR10H2O60403 315 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 AIFM1O95831 613 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 IGKV3-11P04433 115 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 CNTFP26441 200 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 NR0B1P51843 470 aaKnown RBP17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 SMSP52788 366 aa17.65■□□□□ 0.42
TNFRSF1A-212ENST00000539372 PPIAP62937 165 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms