RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PPM1MQ96MI6 270 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 OR2A14Q96R47 310 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 DPH7Q9BTV6 452 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 MROQ9BYG7 248 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 REXO4Q9GZR2 422 aaKnown RBP8.4□□□□□ -1.06
DDB1-213ENST00000539332 PCDHAC1Q9H158 963 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 ARRDC1-AS1Q9H2J1 176 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 SRMSQ9H3Y6 488 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 REEP4Q9H6H4 257 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 GAREM1Q9H706 876 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 IL21RQ9HBE5 538 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 AGPAT4Q9NRZ5 378 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 SLC6A13Q9NSD5 602 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 AHSPQ9NZD4 102 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 ANKMY1Q9P2S6 941 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 PSME2Q9UL46 239 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 RAB23Q9ULC3 237 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 CDC14AQ9UNH5 594 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 SNX7Q9UNH6 387 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 BTBD3Q9Y2F9 522 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 PCDHGA5Q9Y5G8 931 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 AP1M2Q9Y6Q5 423 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 SCN3AQ9NY46 2000 aa8.4□□□□□ -1.06
DDB1-213ENST00000539332 A0A1W2PPW3 197 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 A0A1W2PRQ8 180 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 DHRS12A0PJE2 317 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 FEZF1A0PJY2 475 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 OR2A25A4D2G3 310 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 SAC3D1A6NKF1 404 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 GABRR3A8MPY1 467 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 SOCS2O14508 198 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 HAT1O14929 419 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 ARPC2O15144 300 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 PPM1DO15297 605 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 YKT6O15498 198 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 NDUFS4O43181 175 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 OR1F1O43749 312 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 LRATO95237 230 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 CER1O95813 267 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 B3GALT4O96024 378 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 NTRK1P04629 796 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 SYPP08247 313 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 FURINP09958 794 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 UMPSP11172 480 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 LAMP1P11279 417 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 COX7A2P14406 83 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 TCN1P20061 433 aaPredicted RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 RPL3P39023 403 aaKnown RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 GRIA3P42263 894 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 GZMMP51124 257 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 DAB2P98082 770 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 CYP4F3Q08477 520 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 LRRC74AQ0VAA2 488 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 HYAL2Q12891 473 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 PMS2P3Q13401 168 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 HKDC1Q2TB90 917 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 ANKDD1AQ495B1 522 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 TMEM35AQ53FP2 167 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 ZNF385BQ569K4 471 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 TBCELQ5QJ74 424 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 C6orf132Q5T0Z8 1188 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 BROXQ5VW32 411 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 KIAA1614Q5VZ46 1190 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 OR4F3Q6IEY1 312 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 HMBOX1Q6NT76 420 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 TMEM26Q6ZUK4 368 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 KCTD8Q6ZWB6 473 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 FKBP9P1Q75LS8 142 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 UBE3DQ7Z6J8 389 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 ZNF761Q86XN6 746 aaPredicted RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 GATAD2AQ86YP4 633 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 CBR4Q8N4T8 237 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 DHRSXQ8N5I4 330 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 MFSD9Q8NBP5 474 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 OR2I1PQ8NGU4 316 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 GOT1L1Q8NHS2 421 aaPredicted RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 TAMM41Q96BW9 452 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 ZNF583Q96ND8 569 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 KCTD14Q9BQ13 255 aaPredicted RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 LRFN3Q9BTN0 628 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 DUSP26Q9BV47 211 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 TRIM8Q9BZR9 551 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 BHLHE41Q9C0J9 482 aaPredicted RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 SMOC1Q9H4F8 434 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 RAD21L1Q9H4I0 556 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 IKZF5Q9H5V7 419 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 DDX31Q9H8H2 851 aaKnown RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 UCK1Q9HA47 277 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 SMPD3Q9NY59 655 aaPredicted RBP8.4□□□□□ -1.07
DDB1-213ENST00000539332 ERVK-11Q9UQG0 969 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 PCDHB3Q9Y5E6 796 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 PCDHB14Q9Y5E9 798 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 ENTPD2Q9Y5L3 495 aa8.4□□□□□ -1.07
DDB1-213ENST00000539332 SPTBP11277 2137 aa8.39□□□□□ -1.07
DDB1-213ENST00000539332 RNF103-CHMP3A0A140T963 221 aa8.39□□□□□ -1.07
DDB1-213ENST00000539332 GNG14A0A1W2PPG7 69 aa8.39□□□□□ -1.07
DDB1-213ENST00000539332 LRIT2A6NDA9 550 aa8.39□□□□□ -1.07
DDB1-213ENST00000539332 CLDN25C9JDP6 229 aa8.39□□□□□ -1.07
DDB1-213ENST00000539332 RNASET2O00584 256 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms