RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TC2NQ8N9U0 490 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 TAF15Q92804 592 aaKnown RBP eCLIP8.5□□□□□ -1.05
CPSF7-217ENST00000537162 EBNA1BP2Q99848 306 aaKnown RBP8.5□□□□□ -1.05
CPSF7-217ENST00000537162 C1QTNF5Q9BXJ0 243 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 C10orf88Q9H8K7 445 aa8.5□□□□□ -1.05
CPSF7-217ENST00000537162 GOLGA6L4A6NEF3 574 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 GOLGA6L9A6NEM1 432 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 DPRXA6NFQ7 191 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 SHISA9B4DS77 424 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 C3orf80F5H4A9 247 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 NRDCO43847 1150 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 AVILO75366 819 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 CHMP24386 653 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 LIMS1P48059 325 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 LHX2P50458 406 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 GEMP55040 296 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 RAB8AP61006 207 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 BSPH1Q075Z2 132 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 FUT7Q11130 342 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 TMED2Q15363 201 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 MPEG1Q2M385 716 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 ANKRD20A4Q4UJ75 823 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 TCP11X2Q5H9J9 407 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 ANKRD20A2Q5SQ80 823 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 ANKRD20A1Q5TYW2 823 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 ANKRD20A3Q5VUR7 823 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 TMEM64Q6YI46 380 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 USP43Q70EL4 1123 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 P4HA3Q7Z4N8 544 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 CILP2Q8IUL8 1156 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 TRIM42Q8IWZ5 723 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 C9orf40Q8IXQ3 194 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 OR8K3Q8NH51 312 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 UTP15Q8TED0 518 aaKnown RBP8.49□□□□□ -1.05
CPSF7-217ENST00000537162 TFB1MQ8WVM0 346 aaKnown RBP8.49□□□□□ -1.05
CPSF7-217ENST00000537162 FIG4Q92562 907 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 THAP11Q96EK4 314 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 RILPQ96NA2 401 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 FOXN4Q96NZ1 517 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 MOCS1Q9NZB8 636 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 PDP1Q9P0J1 537 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF148Q9UQR1 794 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 MMACHCQ9Y4U1 282 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 IKBKGQ9Y6K9 419 aa8.49□□□□□ -1.05
CPSF7-217ENST00000537162 PSMD12O00232 456 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-217ENST00000537162 GNB5O14775 395 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 NDUFS4O43181 175 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 EMC8O43402 210 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 ETHE1O95571 254 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 IFNA16P05015 189 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 FBXO45P0C2W1 286 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 SLC35G6P0C7Q6 338 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 FERP16591 822 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF23P17027 643 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 HNF4AP41235 474 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 RPL21P46778 160 aaKnown RBP8.48□□□□□ -1.05
CPSF7-217ENST00000537162 CLDN18P56856 261 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 ARHGAP19Q14CB8 494 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 TSC22D1Q15714 1073 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 ELAVL1Q15717 326 aaKnown RBP8.48□□□□□ -1.05
CPSF7-217ENST00000537162 CTU2Q2VPK5 515 aaKnown RBP8.48□□□□□ -1.05
CPSF7-217ENST00000537162 CT47A1Q5JQC4 288 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-217ENST00000537162 THEMIS2Q5TEJ8 643 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 C11orf87Q6NUJ2 197 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 PPP1R2P3Q6NXS1 205 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF619Q8N2I2 560 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 TMEM132CQ8N3T6 1108 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 MFSD9Q8NBP5 474 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 MORN4Q8NDC4 146 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 SLC2A12Q8TD20 617 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-217ENST00000537162 ZNF721Q8TF20 911 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 DIO2Q92813 273 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 PYCR2Q96C36 320 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 RUNDC3BQ96NL0 473 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 AICDAQ9GZX7 198 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 GBA3Q9H227 469 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 KLHL31Q9H511 634 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 PRTFDC1Q9NRG1 225 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 PIH1D1Q9NWS0 290 aaKnown RBP8.48□□□□□ -1.05
CPSF7-217ENST00000537162 FETUBQ9UGM5 382 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 RNF112Q9ULX5 631 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 PROCRQ9UNN8 238 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 CLCA3PQ9Y6N3 262 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 EXPH5Q8NEV8 1989 aa8.48□□□□□ -1.05
CPSF7-217ENST00000537162 ESYT3A0FGR9 886 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 SLC22A20A6NK97 555 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 SERPIND1P05546 499 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 CSF3P09919 207 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 MYBL1P10243 752 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 COL6A2P12110 1019 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 GZMAP12544 262 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 PAMP19021 973 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 PSMB4P28070 264 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 GFRA1P56159 465 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 UBA52P62987 128 aaKnown RBP8.47□□□□□ -1.05
CPSF7-217ENST00000537162 CCZ1BP86790 482 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 CCZ1P86791 482 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-217ENST00000537162 IRF9Q00978 393 aa8.47□□□□□ -1.05
CPSF7-217ENST00000537162 TBL3Q12788 808 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms