RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TAAR2Q9P1P5 351 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 APOBEC3BQ9UH17 382 aaKnown RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 FBXL2Q9UKC9 423 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 KCNE2Q9Y6J6 123 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 MAU2Q9Y6X3 613 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 DIDO1Q9BTC0 2240 aaKnown RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 TNRC6AQ8NDV7 1962 aaKnown RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 FAM237BA0A1B0GVD1 139 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 VPS37CA5D8V6 355 aaPredicted RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 FAM172BPA6NC97 362 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 J3KRW8 73 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 KPNA3O00505 521 aaPredicted RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 XPO1O14980 1071 aaKnown RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 MCF2LO15068 1137 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 ALOX15BO15296 676 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 MOCS3O95396 460 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 RPN1P04843 607 aaKnown RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 FYNP06241 537 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 TRIM49P0CI25 452 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 TRIM49CP0CI26 452 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 PRKAR1AP10644 381 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 CCL4P13236 92 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 RABIFP47224 123 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 PFN3P60673 137 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 RPS3AP61247 264 aaKnown RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 PITX1P78337 314 aaPredicted RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 MPP1Q00013 466 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 C16orf72Q14CZ0 275 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 DLG2Q15700 870 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 ACCSLQ4AC99 568 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 LACTB2Q53H82 288 aaPredicted RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 ATP1A1-AS1Q5TC04 95 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 FHL5Q5TD97 284 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 NEK5Q6P3R8 708 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 FAM173BQ6P4H8 233 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 GPR180Q86V85 440 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 UNC45BQ8IWX7 931 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 LGI2Q8N0V4 545 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 ARL10Q8N8L6 244 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 Q8N9G6 341 aaPredicted RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 SLC24A4Q8NFF2 622 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 DMBX1Q8NFW5 382 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 UBA3Q8TBC4 463 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 LRRC8CQ8TDW0 803 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 AZIN2Q96A70 460 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 ALG14Q96F25 216 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 ZNF583Q96ND8 569 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 KLF6Q99612 283 aaPredicted RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 SLC17A9Q9BYT1 436 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 TNMDQ9H2S6 317 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 PIGMQ9H3S5 423 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 LRRN3Q9H3W5 708 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 CISHQ9NSE2 258 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 ABCC13Q9NSE7 274 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 DMAC2Q9NW81 257 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 COPG2Q9UBF2 871 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 SPASTQ9UBP0 616 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 OR14J1Q9UGF5 321 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 LIMA1Q9UHB6 759 aaKnown RBP5□□□□□ -1.61
CLIP1-207ENST00000536634 TSPAN16Q9UKR8 245 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 TP53TG5Q9Y2B4 290 aa5□□□□□ -1.61
CLIP1-207ENST00000536634 CHD5Q8TDI0 1954 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 B4E171 279 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 FAM90A26D6RGX4 464 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 TMX2-CTNND1H3BSU7 103 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 K7ERQ8 282 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 ANKRD28O15084 1053 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 FGF17O60258 216 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 WDR1O75083 606 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 JRKO75564 520 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 SLC22A3O75751 556 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 TMEM63AO94886 807 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 IPO7O95373 1038 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 ZNF18P17022 549 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 CD53P19397 219 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 TRIM21P19474 475 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 CD82P27701 267 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 OAS2P29728 719 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 CHRNA3P32297 505 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 UGT1A3P35503 534 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 NNMTP40261 264 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 TSPAN7P41732 249 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 GCLMP48507 274 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 RGS7P49802 495 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 PLK1P53350 603 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 SNRPFP62306 86 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 PHEXP78562 749 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 KLRB1Q12918 225 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 MAD2L1Q13257 205 aaPredicted RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 MED22Q15528 200 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 KNOP1Q1ED39 458 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 LRIF1Q5T3J3 769 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 KCTD16Q68DU8 428 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 OR7E24Q6IFN5 339 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 TTI2Q6NXR4 508 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 KCTD8Q6ZWB6 473 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 ERN2Q76MJ5 926 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 SLC26A9Q7LBE3 791 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms