RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 UGT3A2Q3SY77 523 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 NADK2Q4G0N4 442 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 GALNT18Q6P9A2 607 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 IGFL3Q6UXB1 125 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 LANCL3Q6ZV70 420 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 KBTBD2Q8IY47 623 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 TM9SF4Q92544 642 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 TSLPQ969D9 159 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 APIPQ96GX9 242 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 THOC3Q96J01 351 aaKnown RBP12.69□□□□□ -0.38
RPAIN-205ENST00000536255 LPAR4Q99677 370 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 FAIM2Q9BWQ8 316 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 TRIM4Q9C037 500 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 MED4Q9NPJ6 270 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 C1orf109Q9NX04 203 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 SIRT5Q9NXA8 310 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 ATG4BQ9Y4P1 393 aa12.69□□□□□ -0.38
RPAIN-205ENST00000536255 HELZ2Q9BYK8 2649 aaKnown RBP12.68□□□□□ -0.38
RPAIN-205ENST00000536255 SPENQ96T58 3664 aaKnown RBP12.68□□□□□ -0.38
RPAIN-205ENST00000536255 IGKV3D-11A0A0A0MRZ8 115 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 TCRBV16S1A1N1A0A5B0 115 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 TMEM233B4DJY2 109 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 KLF11O14901 512 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 PIP5K1BO14986 540 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 SEC22BO75396 215 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 LINC00032P0C843 101 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 PRR35P0CG20 571 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 TIA1P31483 386 aaKnown RBP eCLIP12.68□□□□□ -0.38
RPAIN-205ENST00000536255 NR6A1Q15406 480 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 EXT1Q16394 746 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 SFT2D3Q587I9 215 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 NDUFAF5Q5TEU4 345 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 AGAP7PQ5VUJ5 663 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 FAM219BQ5XKK7 198 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 OR52E8Q6IFG1 317 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 RIPOR1Q6ZS17 1223 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 RBMXL3Q8N7X1 1067 aaKnown RBP12.68□□□□□ -0.38
RPAIN-205ENST00000536255 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 AGAP4Q96P64 663 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 LRTM1Q9HBL6 345 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 NECTIN3Q9NQS3 549 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
RPAIN-205ENST00000536255 HAO1Q9UJM8 370 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 WBP11Q9Y2W2 641 aaKnown RBP12.68□□□□□ -0.38
RPAIN-205ENST00000536255 TMED5Q9Y3A6 229 aa12.68□□□□□ -0.38
RPAIN-205ENST00000536255 TNRC6AQ8NDV7 1962 aaKnown RBP12.68□□□□□ -0.38
RPAIN-205ENST00000536255 IGHV3-20A0A0C4DH32 117 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 A0A1W2PR48 441 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 C1orf226A1L170 272 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 PYCARD-AS1I3L0S3 204 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 SNNO75324 88 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 SEC24DO94855 1032 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 AIFM1O95831 613 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 IFNA16P05015 189 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 SERPINA7P05543 415 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 ANXA4P09525 319 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 CD97P48960 835 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 HNRNPFP52597 415 aaKnown RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 ZNF763Q0D2J5 394 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 HEPACAMQ14CZ8 416 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 TERF2Q15554 542 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 ATP6AP1LQ52LC2 224 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 CES4AQ5XG92 561 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 C18orf63Q68DL7 685 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 SLC6A19Q695T7 634 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 JMJD6Q6NYC1 403 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 PAPD4Q6PIY7 484 aaKnown RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 Q6ZSR9 355 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 CLNKQ7Z7G1 428 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 TMEM52Q8NDY8 209 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 LRRC8CQ8TDW0 803 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 C19orf60Q96EN9 201 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 C11orf24Q96F05 449 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 IMMP1LQ96LU5 166 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 PPP3R2Q96LZ3 170 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 SORT1Q99523 831 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 ALOXE3Q9BYJ1 711 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 C20orf27Q9GZN8 174 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 TUBB1Q9H4B7 451 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 ZBTB20Q9HC78 741 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-205ENST00000536255 ADAP2Q9NPF8 381 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 PSME2Q9UL46 239 aa12.67□□□□□ -0.38
RPAIN-205ENST00000536255 SLCO1B7G3V0H7 640 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 LSM1O15116 133 aaKnown RBP12.66□□□□□ -0.38
RPAIN-205ENST00000536255 DYRK3O43781 588 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 LDB3O75112 727 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 SKAP2O75563 359 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-205ENST00000536255 SORBS2O94875 1100 aaKnown RBP12.66□□□□□ -0.38
RPAIN-205ENST00000536255 COX7A2P14406 83 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 DRD2P14416 443 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 PIK3R1P27986 724 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 MAPK1P28482 360 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 RAE1P78406 368 aaKnown RBP12.66□□□□□ -0.38
RPAIN-205ENST00000536255 PLIN5Q00G26 463 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 ELAVL1Q15717 326 aaKnown RBP12.66□□□□□ -0.38
RPAIN-205ENST00000536255 BTBD16Q32M84 506 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 GALNTL6Q49A17 601 aa12.66□□□□□ -0.38
RPAIN-205ENST00000536255 XKR7Q5GH72 579 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms