RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 NFE2L1Q14494 772 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 LASP1Q14847 261 aaKnown RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 DLG2Q15700 870 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 LRRC23Q53EV4 343 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 HSP90AA5PQ58FG0 334 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 ANKRD20A8PQ5CZ79 823 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 ATL3Q6DD88 541 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 OR52E8Q6IFG1 317 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 TRAT1Q6PIZ9 186 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 MOXD1Q6UVY6 613 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 PLPPR4Q7Z2D5 763 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 ADCK2Q7Z695 626 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 ADCK1Q86TW2 530 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 LINC00346Q8IVM7 164 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 VSTM4Q8IW00 320 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CCDC83Q8IWF9 413 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 TUSC5Q8IXB3 177 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CRYBG2Q8N1P7 616 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 MREGQ8N565 214 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 ZNF248Q8NDW4 579 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 Q8NFD4 153 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CCDC148Q8NFR7 591 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 TBCKQ8TEA7 893 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CCDC12Q8WUD4 166 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 ERLEC1Q96DZ1 483 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 FER1L6-AS2Q96M78 137 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 DGAT2Q96PD7 388 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 PSD2Q9BQI7 771 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 RTP3Q9BQQ7 232 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 NAA11Q9BSU3 229 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 CCDC28BQ9BUN5 200 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 SLC25A23Q9BV35 468 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 KIFC3Q9BVG8 833 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CCDC106Q9BWC9 280 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CAPS2Q9BXY5 557 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 NAT10Q9H0A0 1025 aaKnown RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 KCNK15Q9H427 330 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 DMAP1Q9NPF5 467 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 ABCB8Q9NUT2 735 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 ANO10Q9NW15 660 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 NPAP1Q9NZP6 1156 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 AKAP7Q9P0M2 348 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 LARSQ9P2J5 1176 aaKnown RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 WRAP73Q9P2S5 460 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 LEF1Q9UJU2 399 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 OSGIN1Q9UJX0 560 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 ANAPC2Q9UJX6 822 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 PLAGL1Q9UM63 463 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 TMED5Q9Y3A6 229 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 AP1M2Q9Y6Q5 423 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 BDP1A6H8Y1 2624 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 FANCMQ8IYD8 2048 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 NUP210Q8TEM1 1887 aaPredicted RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 MYOFQ9NZM1 2061 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 A0A1B0GVG6 124 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 CCDC162PA2VCL2 907 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 CFAP73A6NFT4 308 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 EPOPA6NHQ4 379 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 GOLGA6L10A6NI86 522 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 E7ENQ6 273 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 NR5A2O00482 541 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 PRAMEF11O60813 436 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 RNASEH1O60930 286 aaKnown RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 C22orf31O95567 290 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 MMP1P03956 469 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 TPOP07202 933 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 CPA3P15088 417 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 MYOGP15173 224 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 ALDH3A1P30838 453 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 STIP1P31948 543 aaKnown RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 RFC2P35250 354 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 WNT5AP41221 380 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 RANBP1P43487 201 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 BMXP51813 675 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 CAPZA1P52907 286 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 DEFB103AP81534 67 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 CDK3Q00526 305 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 AKAP17AQ02040 695 aaKnown RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 PLOD1Q02809 727 aaPredicted RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 PLA2G7Q13093 441 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 RCN2Q14257 317 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 KRT33BQ14525 404 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 NONOQ15233 471 aaKnown RBP eCLIP3.09□□□□□ -1.91
USP48-215ENST00000534705 TAF13Q15543 124 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 ANKDD1AQ495B1 522 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 NHSL2Q5HYW2 709 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 ZC2HC1BQ5TFG8 222 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 PSRC1Q6PGN9 363 aaPredicted RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 KDELC1Q6UW63 502 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 LINC00696Q6ZRV3 163 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 SH2D5Q6ZV89 423 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 OTUD6AQ7L8S5 288 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 OTOAQ7RTW8 1153 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 TMCO2Q7Z6W1 182 aaPredicted RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 DEFB128Q7Z7B8 93 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 ZNF554Q86TJ5 538 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 MYPOPQ86VE0 399 aaPredicted RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 ERICH1Q86X53 443 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms