RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 C1QTNF3Q9BXJ4 246 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 TSPAN10Q9H1Z9 355 aaPredicted RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 MRPL46Q9H2W6 279 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 DDX31Q9H8H2 851 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 MYOTQ9UBF9 498 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 YARS2Q9Y2Z4 477 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 ASB4Q9Y574 426 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 PCNX1Q96RV3 2341 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 MYO7BQ6PIF6 2116 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 A0A1B0GTL3 188 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 EXOC1LA0A1B0GW35 172 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 C17orf105B2RV13 164 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 RIPK2O43353 540 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 PROM1O43490 865 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 SLC19A2O60779 497 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 PRKRAO75569 313 aaKnown RBP13.05□□□□□ -0.32
SF3B2-215ENST00000534307 OR2J2O76002 312 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 SEMA3DO95025 777 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 IGKV3-11P04433 115 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 SNRPAP09012 282 aaKnown RBP13.05□□□□□ -0.32
SF3B2-215ENST00000534307 FAM153BP0C7A2 387 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 STT3AP46977 705 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 SSR4P51571 173 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 NEK2P51955 445 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 FAM153CQ494X1 144 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 GGTA1PQ4G0N0 100 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 ADGRD1Q6QNK2 874 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 HSDL2Q6YN16 418 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 DGAT2L6Q6ZPD8 337 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 TRMT10CQ7L0Y3 403 aaKnown RBP13.05□□□□□ -0.32
SF3B2-215ENST00000534307 SULF2Q8IWU5 870 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 GPALPP1Q8IXQ4 340 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 IFT20Q8IY31 132 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 CYP4Z2PQ8N1L4 340 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 C7orf57Q8NEG2 295 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 ZNF483Q8TF39 744 aaPredicted RBP13.05□□□□□ -0.32
SF3B2-215ENST00000534307 TANKQ92844 425 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 TMEM125Q96AQ2 219 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 RASL10BQ96S79 203 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 OR8D2Q9GZM6 311 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 EPB41L4BQ9H329 900 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 RPF2Q9H7B2 306 aaKnown RBP13.05□□□□□ -0.32
SF3B2-215ENST00000534307 LIN28AQ9H9Z2 209 aaKnown RBP13.05□□□□□ -0.32
SF3B2-215ENST00000534307 PHF11Q9UIL8 331 aa13.05□□□□□ -0.32
SF3B2-215ENST00000534307 KLF13Q9Y2Y9 288 aaPredicted RBP13.05□□□□□ -0.32
SF3B2-215ENST00000534307 TRGV8A0A0C4DH27 118 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 A0A1W2PR48 441 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 A8MT66 165 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 ASNA1O43681 348 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 ZNF354AO60765 605 aaPredicted RBP13.04□□□□□ -0.32
SF3B2-215ENST00000534307 SMIM24O75264 130 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 OR6B1O95007 311 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 ZNF24P17028 368 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 CCNG1P51959 295 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 HK2P52789 917 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 RNF4P78317 190 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 PHEXP78562 749 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 FOLH1Q04609 750 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 RBPJQ06330 500 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 C10orf62Q5T681 223 aaPredicted RBP13.04□□□□□ -0.32
SF3B2-215ENST00000534307 FRG2Q64ET8 278 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 FGD2Q7Z6J4 655 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 OR4N5Q8IXE1 308 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 ZFP62Q8NB50 900 aaPredicted RBP13.04□□□□□ -0.32
SF3B2-215ENST00000534307 POGLUT1Q8NBL1 392 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 C16orf52Q8NHV5 167 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 MARVELD3Q96A59 401 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 MTBPQ96DY7 904 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 CCDC120Q96HB5 630 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 SCYL1Q96KG9 808 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 FRG2BQ96QU4 278 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 LYARQ9NX58 379 aaKnown RBP13.04□□□□□ -0.32
SF3B2-215ENST00000534307 FETUBQ9UGM5 382 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
SF3B2-215ENST00000534307 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
SF3B2-215ENST00000534307 NCOA6Q14686 2063 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-215ENST00000534307 WASHC1A8K0Z3 465 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 HRKO00198 91 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 WWP2O00308 870 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 PPP6CO00743 305 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 MLYCDO95822 493 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 FAM58BPP0C7Q3 252 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 BUD31P41223 144 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-215ENST00000534307 SOX3P41225 446 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 MEOX1P50221 254 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 BIKQ13323 160 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 C3AR1Q16581 482 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 LETMD1Q6P1Q0 360 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 RPS27LQ71UM5 84 aaKnown RBP13.03□□□□□ -0.32
SF3B2-215ENST00000534307 NUDT13Q86X67 352 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 SPPL2CQ8IUH8 684 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 OR4F6Q8NGB9 312 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 ITLN2Q8WWU7 325 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-215ENST00000534307 SENP5Q96HI0 755 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-215ENST00000534307 SERPINI1Q99574 410 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 SEMA4BQ9NPR2 832 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-215ENST00000534307 DEPPQ9NTK1 212 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 TINAGQ9UJW2 476 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms