RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 TNNI3P19429 210 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 PIK3R1P27986 724 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 EPHA3P29320 983 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ASMTP46597 345 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 RRADP55042 308 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ERVK-8P63133 956 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ID2Q02363 134 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 FOLH1Q04609 750 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 EEF1A2Q05639 463 aaKnown RBP10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ATP1A4Q13733 1029 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 SFT2D3Q587I9 215 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 FAM71E1Q6IPT2 247 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 SLC48A1Q6P1K1 146 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 C19orf48Q6RUI8 117 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 EPGNQ6UW88 154 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 LANCL3Q6ZV70 420 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ACAD11Q709F0 780 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 IKBIPQ70UQ0 350 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 GPR155Q7Z3F1 870 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 SPATA19Q7Z5L4 167 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 FAM9CQ8IZT9 166 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 TMEM102Q8N9M5 508 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 OR11G2Q8NGC1 345 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 CEP70Q8NHQ1 597 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.54□□□□□ -0.721e-323■■■■■ 60.7
TRAPPC4-211ENST00000533012 DNAJB14Q8TBM8 379 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ACTRT2Q8TDY3 377 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 UCN3Q969E3 161 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ANKRD9Q96BM1 317 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 LPAR4Q99677 370 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ZNF700Q9H0M5 742 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 MIEF1Q9NQG6 463 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 PNO1Q9NRX1 252 aaKnown RBP10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 NOP53Q9NZM5 478 aaKnown RBP10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 HEY2Q9UBP5 337 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 BAIAP2L1Q9UHR4 511 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 CES1P1Q9UKY3 287 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ZNF780BQ9Y6R6 833 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 CELSR3Q9NYQ7 3312 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 URB1O60287 2271 aaKnown RBP10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 SCN3AQ9NY46 2000 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 IGHV1-45A0A0A0MS14 117 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 NSG1A0A0A6YYJ2 146 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 IGHV3-20A0A0C4DH32 117 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 GOLGA8QA0A0J9YX86 632 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 A0A1W2PQ72 361 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 GOLGA8OA6NCC3 632 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 ARGFXA6NJG6 315 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 A8MUA0 341 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 GOLGA8NF8WBI6 632 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 DYRK3O43781 588 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 FGF17O60258 216 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 ERAL1O75616 437 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 HPP00738 406 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 SLC35E2P0CK97 266 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 TROVE2P10155 538 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 COX6A1P12074 109 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 PCSK2P16519 638 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 DDX5P17844 614 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 CSNK2A2P19784 350 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 DDCP20711 480 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 TACR1P25103 407 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 IDH3AP50213 366 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 XKP51811 444 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 AQP5P55064 265 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 SLC9B1Q4ZJI4 515 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 DCAF10Q5QP82 559 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 OGFOD2Q6N063 350 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 MAVSQ7Z434 540 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 TICAM1Q8IUC6 712 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 SAMD14Q8IZD0 417 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 MMP21Q8N119 569 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 LIX1Q8N485 282 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 ANKS4BQ8N8V4 417 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 CLEC1AQ8NC01 280 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 APOBEC4Q8WW27 367 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 GFM2Q969S9 779 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 MAELQ96JY0 434 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 EGLN2Q96KS0 407 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 DGAT2Q96PD7 388 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 TSSK3Q96PN8 268 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 MESP1Q9BRJ9 268 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 SIKE1Q9BRV8 207 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 PELOQ9BRX2 385 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 TUBB6Q9BUF5 446 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 C1orf50Q9BV19 199 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 TRIM55Q9BYV6 548 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 ING2Q9H160 280 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 PRORYQ9H606 182 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 REEP4Q9H6H4 257 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 ZNF160Q9HCG1 818 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 GIMAP4Q9NUV9 329 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 ASIC5Q9NY37 505 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 EHD3Q9NZN3 535 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 FBXL4Q9UKA2 621 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 UTS2RQ9UKP6 389 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 CLDN16Q9Y5I7 305 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 CLCA3PQ9Y6N3 262 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms