RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OR4F6Q8NGB9 312 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 OR8K3Q8NH51 312 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 SLC2A12Q8TD20 617 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 ASB15Q8WXK1 588 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 PPWD1Q96BP3 646 aaKnown RBP16.02■□□□□ 0.16
PHRF1-204ENST00000532550 GPR137Q96N19 417 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 TSPAN10Q9H1Z9 355 aaPredicted RBP16.02■□□□□ 0.16
PHRF1-204ENST00000532550 ELOVL6Q9H5J4 265 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 TIMMDC1Q9NPL8 285 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 ASB4Q9Y574 426 aa16.02■□□□□ 0.16
PHRF1-204ENST00000532550 MAST4O15021 2626 aa16.02■□□□□ 0.15
PHRF1-204ENST00000532550 A0A0A6YYD5 115 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 TMEM200CA6NKL6 621 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 A8MT66 165 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 A8MVJ9 347 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 WWP2O00308 870 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 ASNA1O43681 348 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 WISP2O76076 250 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 CLDN1O95832 211 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 RPS17P08708 135 aaKnown RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 SBK3P0C264 359 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 CDH13P55290 713 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 RNF4P78317 190 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 IGLV3-21P80748 117 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 TRAF3Q13114 568 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 SGO1Q5FBB7 561 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 HIST2H2BCQ6DN03 193 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 MRM1Q6IN84 353 aaKnown RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 IL20RBQ6UXL0 311 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 C16orf47Q6ZP98 133 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 RPS27LQ71UM5 84 aaKnown RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 SULF2Q8IWU5 870 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 GPALPP1Q8IXQ4 340 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF321PQ8N8H1 164 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 POGLUT1Q8NBL1 392 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 SREK1Q8WXA9 508 aaKnown RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 SENP5Q96HI0 755 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF717Q9BY31 904 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 HPF1Q9NWY4 346 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 TMEM216Q9P0N5 145 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 PSMC3IPQ9P2W1 217 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 SUCOQ9UBS9 1254 aaKnown RBP16.01■□□□□ 0.15
PHRF1-204ENST00000532550 FETUBQ9UGM5 382 aa16.01■□□□□ 0.15
PHRF1-204ENST00000532550 A0A1W2PR48 441 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 ARHGAP10A1A4S6 786 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 CCL21O00585 134 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 PEX1O43933 1283 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 TMPRSS11DO60235 418 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 SLC19A2O60779 497 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 ZG16O60844 167 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 SEMA3DO95025 777 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 GPR75O95800 540 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 GBAP04062 536 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 ALOX15P16050 662 aaPredicted RBP16■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF24P17028 368 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 MEOX1P50221 254 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 HK2P52789 917 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 PLIN5Q00G26 463 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 GGTA1PQ4G0N0 100 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 PAGE2Q7Z2X7 111 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 MDGA2Q7Z553 956 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 ST13P4Q8IZP2 240 aaPredicted RBP16■□□□□ 0.15
PHRF1-204ENST00000532550 EIF1ADQ8N9N8 165 aaKnown RBP16■□□□□ 0.15
PHRF1-204ENST00000532550 MYRIPQ8NFW9 859 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 ACMSDQ8TDX5 336 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 TRPC4APQ8TEL6 797 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF721Q8TF20 911 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF483Q8TF39 744 aaPredicted RBP16■□□□□ 0.15
PHRF1-204ENST00000532550 ART5Q96L15 291 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 PELOQ9BRX2 385 aaKnown RBP16■□□□□ 0.15
PHRF1-204ENST00000532550 C1QTNF3Q9BXJ4 246 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 TXLNGYQ9BZA5 131 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 TBK1Q9UHD2 729 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 SH3BGRL2Q9UJC5 107 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 SNX6Q9UNH7 406 aa16■□□□□ 0.15
PHRF1-204ENST00000532550 PCNX1Q96RV3 2341 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 NBPF19A0A087WUL8 3843 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 GLOD5A6NK44 160 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 WASHC1A8K0Z3 465 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 GOLGA8RI6L899 631 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 PPP6CO00743 305 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 OR10H2O60403 315 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 PRKRAO75569 313 aaKnown RBP15.99■□□□□ 0.15
PHRF1-204ENST00000532550 SUPT7LO94864 414 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 KLK1P06870 262 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 NR2F6P10588 404 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 TSPAN8P19075 237 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 HSD17B3P37058 310 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 CA7P43166 264 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 HERVK_113P63132 956 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 CLCQ05315 142 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 MTFR2Q6P444 385 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 SPPL2CQ8IUH8 684 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 SIAH3Q8IW03 269 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 GHDCQ8N2G8 530 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 SELENOMQ8WWX9 145 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 MAGED4Q96JG8 741 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 RASL10BQ96S79 203 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 ERVK-6Q9BXR3 956 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms