RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 MLIPQ5VWP3 458 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 STEAP3Q658P3 488 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZNF385CQ66K41 422 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 SULT1C3Q6IMI6 304 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CDPF1Q6NVV7 123 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 PRMT9Q6P2P2 845 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 KLC3Q6P597 504 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM198BQ6UWH4 519 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ISCA2Q86U28 154 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 PLD3Q8IV08 490 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 GSPT2Q8IYD1 628 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TCAIMQ8N3R3 496 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TBC1D19Q8N5T2 526 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 METTL27Q8N6F8 245 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ABHD11Q8NFV4 315 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 KCTD4Q8WVF5 259 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 APOBEC4Q8WW27 367 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC5A11Q8WWX8 675 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 EXTL1Q92935 676 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 EXT2Q93063 718 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 PTERQ96BW5 349 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 RHBDF1Q96CC6 855 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 WBP1Q96G27 269 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TSNARE1Q96NA8 513 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR2A5Q96R48 311 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR4K3Q96R72 315 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 DMRTA2Q96SC8 542 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 PAFAH2Q99487 392 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TP63Q9H3D4 680 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ALG9Q9H6U8 611 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZNF304Q9HCX3 659 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 HEYLQ9NQ87 328 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 SNX15Q9NRS6 342 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 WWOXQ9NZC7 414 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CD274Q9NZQ7 290 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CDC14AQ9UNH5 594 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 SH2B3Q9UQQ2 575 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 RUVBL1Q9Y265 456 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC22A14Q9Y267 594 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 SDK2Q58EX2 2172 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 DMXL2Q8TDJ6 3036 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 LAMA5O15230 3695 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZFHX4Q86UP3 3567 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 ADAMTS20P59510 1910 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 TRBC2A0A5B9 178 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SYCE1LA8MT33 242 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SUPT3HB4E1H0 165 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 H0Y3Z8 333 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 PYCARD-AS1I3L0S3 204 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 TAPBPO15533 448 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 PRPF4O43172 522 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR1F1O43749 312 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 KERAO60938 352 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 GUCY1B2O75343 617 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SUPT3HO75486 399 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 ERAL1O75616 437 aaKnown RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 STK16O75716 305 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 KLF7O75840 302 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 IPO13O94829 963 aaKnown RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 WDR47O94967 919 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 KLHL2O95198 593 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLU7O95391 586 aaKnown RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 ONECUT2O95948 504 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 STATHP02808 62 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 ALDOAP04075 364 aaKnown RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 CAPN1P07384 714 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 FURINP09958 794 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC35G6P0C7Q6 338 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM87AP0C7U9 286 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SFTPCP11686 197 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 EGR1P18146 543 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 GNAZP19086 355 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 ITGAXP20702 1163 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 GGT5P36269 586 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 GMPRP36959 345 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR1D4P47884 311 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC6A12P48065 614 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 GLRBP48167 497 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 CSRP3P50461 194 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SOX8P57073 446 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 MXRA7P84157 204 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 TLE1Q04724 770 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 DLG1Q12959 904 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC29A2Q14542 456 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 NDUFA9Q16795 377 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 HKDC1Q2TB90 917 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 C18orf21Q32NC0 220 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 LINC00303Q3SY05 128 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 FLYWCH1Q4VC44 716 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SOWAHCQ53LP3 525 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM69BQ5VUD6 431 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 CYP20A1Q6UW02 462 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 LYPD4Q6UWN0 246 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SZRD1Q7Z422 152 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 PXKQ7Z7A4 578 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 TMPRSS11BQ86T26 416 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 ASPGQ86U10 573 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 KLHDC8AQ8IYD2 350 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 CENPLQ8N0S6 344 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 MFSD4AQ8N468 514 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms