RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CCNT2O60583 730 aaKnown RBP7.92□□□□□ -1.14
SSBP3-212ENST00000528930 KLHL41O60662 606 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 SHOX2O60902 331 aaPredicted RBP7.92□□□□□ -1.14
SSBP3-212ENST00000528930 SUPT3HO75486 399 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 CLEC3AO75596 197 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 S100BP04271 92 aaPredicted RBP7.92□□□□□ -1.14
SSBP3-212ENST00000528930 INHBAP08476 426 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 CYC1P08574 325 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 ABHD2P08910 425 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 FAM153BP0C7A2 387 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 RHOXF2BP0C7M4 288 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 PRR35P0CG20 571 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 C8orf89P0DMQ9 161 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 IL10P22301 178 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 GSTM2P28161 218 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 HNRNPH1P31943 449 aaKnown RBP7.92□□□□□ -1.14
SSBP3-212ENST00000528930 HNF4AP41235 474 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 MSH2P43246 934 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 SERPINB9P50453 376 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 RHAGQ02094 409 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 CHIT1Q13231 466 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 ACAP2Q15057 778 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 TBCCQ15814 346 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 PDK4Q16654 411 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 FAM83EQ2M2I3 478 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 ADPRMQ3LIE5 342 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 FAM153CQ494X1 144 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 HSP90B2PQ58FF3 399 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 XKR6Q5GH73 641 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 TOR1AIP1Q5JTV8 583 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 PODNL1Q6PEZ8 512 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 LANCL3Q6ZV70 420 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 ABHD13Q7L211 337 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 LRRC70Q7Z2Q7 622 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 ANKRD37Q7Z713 158 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 C10orf67Q8IYJ2 551 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 KRT78Q8N1N4 520 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 SNX31Q8N9S9 440 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 UHMK1Q8TAS1 419 aaKnown RBP7.92□□□□□ -1.14
SSBP3-212ENST00000528930 ADAMTS18Q8TE60 1221 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 UBTD2Q8WUN7 234 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 WFDC12Q8WWY7 111 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 NR4A3Q92570 626 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 MS4A6EQ96DS6 147 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 PTCD3Q96EY7 689 aaKnown RBP7.92□□□□□ -1.14
SSBP3-212ENST00000528930 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 OR1F2PQ96R84 312 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 RHOXF2Q9BQY4 288 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 RHBGQ9H310 441 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 EPB41L4BQ9H329 900 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 CLK4Q9HAZ1 481 aaKnown RBP7.92□□□□□ -1.14
SSBP3-212ENST00000528930 A0A0G2JN53 185 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 URADA6NGE7 173 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 LRRC14BA6NHZ5 514 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 SYCE1LA8MT33 242 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 TRIM49D1C9J1S8 452 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 K7EPI3 171 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 RIPK2O43353 540 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 CDC123O75794 336 aaPredicted RBP7.91□□□□□ -1.14
SSBP3-212ENST00000528930 RGS9O75916 674 aaPredicted RBP7.91□□□□□ -1.14
SSBP3-212ENST00000528930 SERPINA7P05543 415 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 FHP07954 510 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 MYBL2P10244 700 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 ITGAMP11215 1152 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 SOX11P35716 441 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 BTG2P78543 158 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 IRF8Q02556 426 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 LAPTM5Q13571 262 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 RUNX2Q13950 521 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF169Q14929 603 aaPredicted RBP7.91□□□□□ -1.14
SSBP3-212ENST00000528930 SETDB1Q15047 1291 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 MINDY4Q4G0A6 757 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 TECRLQ5HYJ1 363 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 MFSD4BQ5TF39 518 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 AGAP7PQ5VUJ5 663 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 HMBOX1Q6NT76 420 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 NIPAL1Q6NVV3 410 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 RPUSD3Q6P087 351 aaKnown RBP7.91□□□□□ -1.14
SSBP3-212ENST00000528930 GFRALQ6UXV0 394 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 TRMT10CQ7L0Y3 403 aaKnown RBP7.91□□□□□ -1.14
SSBP3-212ENST00000528930 CPEB2Q7Z5Q1 589 aaKnown RBP7.91□□□□□ -1.14
SSBP3-212ENST00000528930 KBTBD2Q8IY47 623 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 LAS2Q8IYD9 372 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 CA13Q8N1Q1 262 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 TTLQ8NG68 377 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 BRIX1Q8TDN6 353 aaKnown RBP7.91□□□□□ -1.14
SSBP3-212ENST00000528930 METTL21AQ8WXB1 218 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 TSLPQ969D9 159 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 GAL3ST3Q96A11 431 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 TBC1D20Q96BZ9 403 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 AGAP4Q96P64 663 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 QRFPRQ96P65 431 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 LMF1Q96S06 567 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 TUBB6Q9BUF5 446 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 EFCAB11Q9BUY7 163 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 RBCK1Q9BYM8 510 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 VPS11Q9H270 941 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 PRDM7Q9NQW5 492 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 RIC8BQ9NVN3 520 aa7.91□□□□□ -1.14
SSBP3-212ENST00000528930 OPTCQ9UBM4 332 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms