RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 NDUFS8O00217 210 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 SSX5O60225 188 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 MTX2O75431 263 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 ZNF254O75437 659 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 PRKRAO75569 313 aaKnown RBP5.21□□□□□ -1.58
PCF11-202ENST00000528336 RHBDL1O75783 438 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 KRT34O76011 436 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 OR6B1O95007 311 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 NPPAP01160 153 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 PCCBP05166 539 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 OR52Z1P0C646 297 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 LINGO3P0C6S8 592 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 PLA2G4BP0C869 781 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 CCDC130P13994 396 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 FUT1P19526 365 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 CA4P22748 312 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 NR0B1P51843 470 aaKnown RBP5.21□□□□□ -1.58
PCF11-202ENST00000528336 ATP12AP54707 1039 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 CTAG1AP78358 180 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 RBPJQ06330 500 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 MZT1Q08AG7 82 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 SQLEQ14534 574 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 PTPRCAPQ14761 206 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 TMEM30BQ3MIR4 351 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 GTDC1Q4AE62 458 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 CFAP157Q5JU67 520 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 FFAR4Q5NUL3 377 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 SLC16A9Q7RTY1 509 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 ZNF573Q86YE8 665 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 CDK20Q8IZL9 346 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 MAPKAPK5-AS1Q8N8E1 139 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 SSMEM1Q8WWF3 244 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 SYN2Q92777 582 aaPredicted RBP5.21□□□□□ -1.58
PCF11-202ENST00000528336 LGALS12Q96DT0 336 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 C8orf76Q96K31 380 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 SECISBP2Q96T21 854 aaKnown RBP5.21□□□□□ -1.58
PCF11-202ENST00000528336 SEPHS2Q99611 448 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 LITAFQ99732 161 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 ZNF577Q9BSK1 485 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 LAT2Q9GZY6 243 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 FZD8Q9H461 694 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 ATP6V1HQ9UI12 483 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 ZDHHC2Q9UIJ5 367 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 TSPAN16Q9UKR8 245 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 SNX7Q9UNH6 387 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 SNX6Q9UNH7 406 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 MRPS7Q9Y2R9 242 aaKnown RBP5.21□□□□□ -1.58
PCF11-202ENST00000528336 NME7Q9Y5B8 376 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 MAP2P11137 1827 aaKnown RBP5.2□□□□□ -1.58
PCF11-202ENST00000528336 LOC101059948A0A1B0GTJ6 334 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 CETN3O15182 167 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 ATP6V0E1O15342 81 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 TTI1O43156 1089 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 TRMUO75648 421 aaKnown RBP5.2□□□□□ -1.58
PCF11-202ENST00000528336 YEATS4O95619 227 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 CXCL14O95715 111 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 CXCL10P02778 98 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 RLN1P04808 185 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 SERPING1P05155 500 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 DANCRP0C864 163 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 EFNA1P20827 205 aaPredicted RBP5.2□□□□□ -1.58
PCF11-202ENST00000528336 CYP2A7P20853 494 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 PTPN6P29350 595 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 EPS15P42566 896 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 HUNKP57058 714 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 B3GALT5-AS1P59052 145 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 GNB1P62873 340 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 CDR2Q01850 454 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 SPAG1Q07617 926 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 ACSM1Q08AH1 577 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 SPP2Q13103 211 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 GIT2Q14161 759 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 ARHGAP19Q14CB8 494 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 MRGPRG-AS1Q2M3A8 158 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 NADK2Q4G0N4 442 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 KLHL26Q53HC5 615 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 ELFN2Q5R3F8 820 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 TAF3Q5VWG9 929 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 PRAMEF8Q5VWM4 474 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 OR6B2Q6IFH4 312 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 ADAM5Q6NVV9 412 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 ZNF790Q6PG37 636 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 ARSKQ6UWY0 536 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 PRSS42Q7Z5A4 293 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 CCNYQ8ND76 341 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 NPEPL1Q8NDH3 523 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 CCDC107Q8WV48 283 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 C17orf50Q8WW18 174 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 ZNF560Q96MR9 790 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 PSKH2Q96QS6 385 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 PLIN2Q99541 437 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 DDX50Q9BQ39 737 aaKnown RBP5.2□□□□□ -1.58
PCF11-202ENST00000528336 RAB17Q9H0T7 212 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 CARD9Q9H257 536 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 LMAN1LQ9HAT1 526 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 RNPEPL1Q9HAU8 725 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 Q9N2K0 584 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 PALMDQ9NP74 551 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 SDR39U1Q9NRG7 319 aaPredicted RBP5.2□□□□□ -1.58
PCF11-202ENST00000528336 LRWD1Q9UFC0 647 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms