RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 DIRAS2Q96HU8 199 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 RANGRFQ9HD47 186 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 THSD1Q9NS62 852 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 SEC14L4Q9UDX3 406 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 TMPRSS11EQ9UL52 423 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 SNX7Q9UNH6 387 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CMAHPQ9Y471 501 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 ANAPC1Q9H1A4 1944 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 SMIM30A4D0T7 59 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 FABP12A6NFH5 140 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 ZAR1LA6NP61 321 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 H0YIV9 168 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 OR10H3O60404 316 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 TGFB1P01137 390 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CYP17A1P05093 508 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 IGFBP1P08833 259 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CBLP22681 906 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 BDKRB1P46663 353 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 PREPP48147 710 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 ALDH9A1P49189 494 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 MVDP53602 400 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF33BQ06732 778 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 RBBP4Q09028 425 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 SLC5A12Q1EHB4 618 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 LILRA6Q6PI73 481 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CASP12Q6UXS9 341 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 BCDIN3DQ7Z5W3 292 aaKnown RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 OXR1Q8N573 874 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CAMKK1Q8N5S9 505 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 VN1R2Q8NFZ6 395 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 SLC22A4Q9H015 551 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 ABCB9Q9NP78 766 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 RPRD1BQ9NQG5 326 aaKnown RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 B4GALT6Q9UBX8 382 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 ANGPT4Q9Y264 503 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 NEDD8-MDP1E9PL57 170 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 HSD3B1P14060 373 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CEBPBP17676 345 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 RHCEP18577 417 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 HSD3B2P26439 372 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CD70P32970 193 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 SPINT3P49223 89 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 DLX2Q07687 328 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 C1DQ13901 141 aaKnown RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 PYDC2Q56P42 97 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 FAM180BQ6P0A1 224 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 C19orf48Q6RUI8 117 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 TMEM159Q96B96 161 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 FYTTD1Q96QD9 318 aaKnown RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 OR4K3Q96R72 315 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 PRRG3Q9BZD7 231 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 BHLHE41Q9C0J9 482 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 BRF2Q9HAW0 419 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 C1GALT1Q9NS00 363 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 STOX2Q9P2F5 926 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 KCNE2Q9Y6J6 123 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 MYO10Q9HD67 2058 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 TMEM202A6NGA9 273 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 C5orf58C9J3I9 102 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 MYL12BO14950 172 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 EFCAB14O75071 495 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 CSO75390 466 aaKnown RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 SLC16A8O95907 504 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 CATP04040 527 aaKnown RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 C1SP09871 688 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 TSPAN19P0C672 248 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF8P17098 575 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 PBLDP30039 288 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 C21orf58P58505 322 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 RHAGQ02094 409 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 DUSP7Q16829 419 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF630Q2M218 657 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 TCEAL5Q5H9L2 206 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 MED27Q6P2C8 311 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 PRR23CQ6ZRP0 262 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 TMC8Q8IU68 726 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 C19orf43Q9BQ61 176 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 TAPBPLQ9BX59 468 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 UCK2Q9BZX2 261 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 OR51B5Q9H339 312 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 FTSJ1Q9UET6 329 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 V9GYH0 126 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 TRBV4-1A0A0J9YWV2 114 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 YES1P07947 543 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 CSNK1DP48730 415 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 PSPHP78330 225 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF763Q0D2J5 394 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 FCHO2Q0JRZ9 810 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 KCNC3Q14003 757 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 CCDC85BQ15834 202 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF79Q15937 498 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 CLPPQ16740 277 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 PAQR6Q6TCH4 344 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 USP30Q70CQ3 517 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF438Q7Z4V0 828 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 NOXA1Q86UR1 476 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 NLRP8Q86W28 1048 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 TCEANCQ8N8B7 351 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms