RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 SEMA3DO95025 777 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 RASAL1O95294 804 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 CLPSP04118 112 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 NUDT17P0C025 328 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 CT62P0C5K7 136 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 NR2F6P10588 404 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 CREB1P16220 341 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 KRT4P19013 534 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 PTGER1P34995 402 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 STT3AP46977 705 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 HK2P52789 917 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 KCNK10P57789 538 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 TAS2R50P59544 299 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 OC90Q02509 493 aaPredicted RBP8.85□□□□□ -0.99
PABPC1-222ENST00000523555 DUSP2Q05923 314 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 SLC18A2Q05940 514 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 IFT88Q13099 833 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 RASA2Q15283 850 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 TERF2Q15554 542 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 FAM180BQ6P0A1 224 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 WDR93Q6P2C0 686 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 CYP20A1Q6UW02 462 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 FAM180AQ6UWF9 173 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 COMMD6Q7Z4G1 85 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 GALNTL5Q7Z4T8 443 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 LCA5Q86VQ0 697 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 LGI4Q8N135 537 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 ARMC10Q8N2F6 343 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 FAM26EQ8N5C1 309 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 ST6GALNAC3Q8NDV1 305 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 AGAP11Q8TF27 550 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.85□□□□□ -0.992e-6■■■■■ 54.4
PABPC1-222ENST00000523555 ZNF382Q96SR6 550 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 SERPINI1Q99574 410 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 UTP23Q9BRU9 249 aaKnown RBP8.85□□□□□ -0.99
PABPC1-222ENST00000523555 SLC29A3Q9BZD2 475 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 SHCBP1LQ9BZQ2 653 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 OR8D2Q9GZM6 311 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 TSPAN10Q9H1Z9 355 aaPredicted RBP8.85□□□□□ -0.99
PABPC1-222ENST00000523555 ELOVL6Q9H5J4 265 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 OLAHQ9NV23 265 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 LRFN1Q9P244 771 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 DCDC2Q9UHG0 476 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 PHF11Q9UIL8 331 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 ERRFI1Q9UJM3 462 aaPredicted RBP8.85□□□□□ -0.99
PABPC1-222ENST00000523555 CLCA3PQ9Y6N3 262 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 NINQ8N4C6 2090 aa8.85□□□□□ -0.99
PABPC1-222ENST00000523555 DIDO1Q9BTC0 2240 aaKnown RBP8.85□□□□□ -0.99
PABPC1-222ENST00000523555 HECTD1Q9ULT8 2610 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 FREM3P0C091 2139 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 MYO7BQ6PIF6 2116 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 BLACEA4D250 179 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 WWP2O00308 870 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 COPEO14579 308 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 CDH16O75309 829 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 SPAG7O75391 227 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 OR2J2O76002 312 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 IGKV3-11P04433 115 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 SP1P08047 785 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 MYL2P10916 166 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 TNNI3P19429 210 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 SERPINB3P29508 390 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 TRHRP34981 398 aaPredicted RBP8.84□□□□□ -0.99
PABPC1-222ENST00000523555 CRHR1P34998 444 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 SOX18P35713 384 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 NR0B1P51843 470 aaKnown RBP8.84□□□□□ -0.99
PABPC1-222ENST00000523555 ARFIP1P53367 373 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 RNF4P78317 190 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 RAE1P78406 368 aaKnown RBP8.84□□□□□ -0.99
PABPC1-222ENST00000523555 HMGCS1Q01581 520 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 SERTAD2Q14140 314 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 RCN2Q14257 317 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 PCLAFQ15004 111 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 RNFT1Q5M7Z0 435 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 HIST2H2BCQ6DN03 193 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 GPRIN3Q6ZVF9 776 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 MDGA2Q7Z553 956 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.84□□□□□ -0.99
PABPC1-222ENST00000523555 TRABD2AQ86V40 505 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 SLC22A9Q8IVM8 553 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 C9orf40Q8IXQ3 194 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 TMEM132CQ8N3T6 1108 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 CPSF7Q8N684 471 aaKnown RBP8.84□□□□□ -0.99
PABPC1-222ENST00000523555 C1orf52Q8N6N3 182 aaKnown RBP8.84□□□□□ -0.99
PABPC1-222ENST00000523555 CCNYL1Q8N7R7 359 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 BCORP1Q8N888 145 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 MORN4Q8NDC4 146 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 MYRIPQ8NFW9 859 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 OR14A16Q8NHC5 309 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 NR4A3Q92570 626 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 CAVIN3Q969G5 261 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 APIPQ96GX9 242 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 FRMD6Q96NE9 622 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 DGAT2Q96PD7 388 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 CENPKQ9BS16 269 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 MECRQ9BV79 373 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 PARD6BQ9BYG5 372 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 ACPTQ9BZG2 426 aa8.84□□□□□ -0.99
PABPC1-222ENST00000523555 TRIM45Q9H8W5 580 aaPredicted RBP8.84□□□□□ -0.99
PABPC1-222ENST00000523555 MID1IP1Q9NPA3 183 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms