RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 UNC79Q9P2D8 2635 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 H0YIV9 168 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 PRRG2O14669 202 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 EEDO75530 441 aaKnown RBP19.19■□□□□ 0.66
SDCBP-209ENST00000522243 PTX3P26022 381 aaPredicted RBP19.19■□□□□ 0.66
SDCBP-209ENST00000522243 STT3AP46977 705 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 IGLV3-21P80748 117 aaPredicted RBP19.19■□□□□ 0.66
SDCBP-209ENST00000522243 TNFRSF17Q02223 184 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 PLGLB1Q02325 96 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 FOLH1Q04609 750 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 ZNF630Q2M218 657 aaPredicted RBP19.19■□□□□ 0.66
SDCBP-209ENST00000522243 CMPK2Q5EBM0 449 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 TICAM1Q8IUC6 712 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 GPALPP1Q8IXQ4 340 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 ZCCHC7Q8N3Z6 543 aaKnown RBP19.19■□□□□ 0.66
SDCBP-209ENST00000522243 ATP6V1E2Q96A05 226 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 REPS1Q96D71 796 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 PAFAH2Q99487 392 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 FMO2Q99518 471 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 ZNF717Q9BY31 904 aaPredicted RBP19.19■□□□□ 0.66
SDCBP-209ENST00000522243 DEFB127Q9H1M4 99 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 NOL11Q9H8H0 719 aaKnown RBP19.19■□□□□ 0.66
SDCBP-209ENST00000522243 MS4A12Q9NXJ0 267 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 COPS7AQ9UBW8 275 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 PHF11Q9UIL8 331 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 TSC22D4Q9Y3Q8 395 aa19.19■□□□□ 0.66
SDCBP-209ENST00000522243 A0A0G2JMM0 328 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 A0A1W2PPB8 328 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 A0A1W2PRS3 328 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 KIR3DP1A8MWS1 328 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 HRKO00198 91 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 OR7A17O14581 309 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 TMPRSS11DO60235 418 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 UGDHO60701 494 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 TPOP07202 933 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 COX7A2P14406 83 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 ECHS1P30084 290 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 TLX1P31314 330 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-209ENST00000522243 PTGS2P35354 604 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 BSGP35613 385 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 MAGEA12P43365 314 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 ASPHQ12797 758 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 L3MBTL4Q8NA19 623 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 OR2M7Q8NG81 312 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 OR52B6Q8NGF0 335 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 OR5L2Q8NGL0 311 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 OR8K3Q8NH51 312 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 WDR20Q8TBZ3 569 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 UCN3Q969E3 161 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 RBM18Q96H35 190 aaKnown RBP19.18■□□□□ 0.66
SDCBP-209ENST00000522243 SENP5Q96HI0 755 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-209ENST00000522243 XPR1Q9UBH6 696 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 IKBKGQ9Y6K9 419 aa19.18■□□□□ 0.66
SDCBP-209ENST00000522243 A0A0A6YYD5 115 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 A0A1W2PR48 441 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 GLOD5A6NK44 160 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 FAM166BA8MTA8 275 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 PROM1O43490 865 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 CLDN9O95484 217 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 GBAP04062 536 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 RBP1P09455 135 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 BUD31P41223 144 aaPredicted RBP19.17■□□□□ 0.66
SDCBP-209ENST00000522243 CYP20A1Q6UW02 462 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 RTL4Q6ZR62 310 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 CD163Q86VB7 1156 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 MCEMP1Q8IX19 187 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 FAM57AQ8TBR7 257 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 TANKQ92844 425 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 NSUN5Q96P11 429 aaKnown RBP19.17■□□□□ 0.66
SDCBP-209ENST00000522243 CNPPD1Q9BV87 410 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 ASB4Q9Y574 426 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 HRH3Q9Y5N1 445 aa19.17■□□□□ 0.66
SDCBP-209ENST00000522243 PCNX1Q96RV3 2341 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 TRIM49D1C9J1S8 452 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 C19orf84I3L1E1 186 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 ADAM10O14672 748 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 FAM58BPP0C7Q3 252 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 CTAGE8P0CG41 777 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 ALOX15P16050 662 aaPredicted RBP19.16■□□□□ 0.66
SDCBP-209ENST00000522243 SERPINB9P50453 376 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 CCNG1P51959 295 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 PPIAP62937 165 aaKnown RBP19.16■□□□□ 0.66
SDCBP-209ENST00000522243 HERVK_113P63132 956 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 ERVK-8P63133 956 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 PLIN5Q00G26 463 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 CUL3Q13618 768 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 MRM1Q6IN84 353 aaKnown RBP19.16■□□□□ 0.66
SDCBP-209ENST00000522243 OPN5Q6U736 354 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 RPS27LQ71UM5 84 aaKnown RBP19.16■□□□□ 0.66
SDCBP-209ENST00000522243 CTAGE4Q8IX94 777 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 C9orf40Q8IXQ3 194 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 MNS1Q8NEH6 495 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 DCAKDQ8WVC6 231 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 ISL2Q96A47 359 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 DMRTA2Q96SC8 542 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 ERVK-6Q9BXR3 956 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 TSPYL1Q9H0U9 437 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 DDX31Q9H8H2 851 aaKnown RBP19.16■□□□□ 0.66
SDCBP-209ENST00000522243 CHST11Q9NPF2 352 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 LYARQ9NX58 379 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms