RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ADAP2Q9NPF8 381 aa8.7□□□□□ -1.02
HDAC3-215ENST00000519474 XPR1Q9UBH6 696 aa8.7□□□□□ -1.02
HDAC3-215ENST00000519474 PLEKHB1Q9UF11 243 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF225Q9UK10 706 aa8.7□□□□□ -1.02
HDAC3-215ENST00000519474 PCTPQ9UKL6 214 aa8.7□□□□□ -1.02
HDAC3-215ENST00000519474 TMCO1Q9UM00 188 aa8.7□□□□□ -1.02
HDAC3-215ENST00000519474 CLCA3PQ9Y6N3 262 aa8.7□□□□□ -1.02
HDAC3-215ENST00000519474 TRBV11-1A0A0K0K1C0 115 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 EXOC1LA0A1B0GW35 172 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 A0A1W2PR48 441 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 ASNA1O43681 348 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 TMPRSS11DO60235 418 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 FGF17O60258 216 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 DLX3O60479 287 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF354AO60765 605 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-215ENST00000519474 SMIM24O75264 130 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 EEDO75530 441 aaKnown RBP8.69□□□□□ -1.02
HDAC3-215ENST00000519474 ITGA10O75578 1167 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 UNC5CO95185 931 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 TSPAN8P19075 237 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 COL8A1P27658 744 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 HSD17B3P37058 310 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 SSR2P43308 183 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 CCNG1P51959 295 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 STX4Q12846 297 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 BIKQ13323 160 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 SERTAD2Q14140 314 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 UNC50Q53HI1 259 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 KRTCAP3Q53RY4 240 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 TEX35Q5T0J7 233 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 FAM219BQ5XKK7 198 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 SH2D5Q6ZV89 423 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 CCDC80Q76M96 950 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 MDGA2Q7Z553 956 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 SULF2Q8IWU5 870 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 HORMAD2Q8N7B1 307 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 TMEM178AQ8NBL3 297 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 MYRIPQ8NFW9 859 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 OR4F6Q8NGB9 312 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 DOK4Q8TEW6 326 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF721Q8TF20 911 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 TANKQ92844 425 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 DAZLQ92904 295 aaKnown RBP8.69□□□□□ -1.02
HDAC3-215ENST00000519474 SENP5Q96HI0 755 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-215ENST00000519474 C1QTNF3Q9BXJ4 246 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 MRPL46Q9H2W6 279 aaKnown RBP8.69□□□□□ -1.02
HDAC3-215ENST00000519474 SEMA4BQ9NPR2 832 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-215ENST00000519474 MS4A12Q9NXJ0 267 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 MYOTQ9UBF9 498 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 SEC14L3Q9UDX4 400 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 PPT2Q9UMR5 302 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF835Q9Y2P0 537 aa8.69□□□□□ -1.02
HDAC3-215ENST00000519474 YARS2Q9Y2Z4 477 aaKnown RBP8.69□□□□□ -1.02
HDAC3-215ENST00000519474 MYO7BQ6PIF6 2116 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 SVILO95425 2214 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 ICE1Q9Y2F5 2266 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 A0A0A6YYD5 115 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 A0A1B0GUH1 482 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 A0A1W2PPM1 405 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 A1L4Q6 167 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 A8MT66 165 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 FOXO6A8MYZ6 492 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 C17orf105B2RV13 164 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 FCHO1O14526 889 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 PGRMC2O15173 223 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 NME2P1O60361 137 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 ERLIN1O75477 346 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 PRKRAO75569 313 aaKnown RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 SLC25A12O75746 678 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 OR2J2O76002 312 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 GPR75O95800 540 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 GBAP04062 536 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 HNRNPCP07910 306 aaKnown RBP eCLIP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 RPS17P08708 135 aaKnown RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 FAM58BPP0C7Q3 252 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 IMPDH1P20839 514 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 NME2P22392 152 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 RAP1GDS1P52306 607 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 SH3BGRP55822 239 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 ALDH6A1Q02252 535 aaKnown RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 TRAF3Q13114 568 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 PIGGQ5H8A4 983 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 C1QL3Q5VWW1 255 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 FRG2Q64ET8 278 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 TAOK1Q7L7X3 1001 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 SIAH3Q8IW03 269 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 TMEM156Q8N614 296 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 EIF1ADQ8N9N8 165 aaKnown RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 C7orf57Q8NEG2 295 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF483Q8TF39 744 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 MZB1Q8WU39 189 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 REPS1Q96D71 796 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 MTBPQ96DY7 904 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 RBM18Q96H35 190 aaKnown RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 FRMD6Q96NE9 622 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 FRG2BQ96QU4 278 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 SERPINI1Q99574 410 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 CCDC77Q9BR77 488 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 OR8D2Q9GZM6 311 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 L2HGDHQ9H9P8 463 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms