RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ACADVLP49748 655 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 ARFIP1P53367 373 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 ANKRD55Q3KP44 614 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 SPATA46Q5T0L3 261 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 FAM72AQ5TYM5 149 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 LIPJQ5W064 366 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 FAM72DQ6L9T8 149 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 RHBDD2Q6NTF9 364 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 SLC39A4Q6P5W5 647 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 SH2D5Q6ZV89 423 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 BNIPLQ7Z465 357 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 GPR142Q7Z601 462 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 TMEM110Q86TL2 294 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 LCA5Q86VQ0 697 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 FAM72BQ86X60 149 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 CATSPERDQ86XM0 798 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 WDR49Q8IV35 697 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 OR4N5Q8IXE1 308 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 PARP8Q8N3A8 854 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 TCEANCQ8N8B7 351 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 ADAD2Q8NCV1 583 aaKnown RBP2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 KBTBD8Q8NFY9 601 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 OR6F1Q8NGZ6 308 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 MAPK15Q8TD08 544 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 AZIN2Q96A70 460 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 PINX1Q96BK5 328 aaKnown RBP2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 UHRF2Q96PU4 802 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 ACCSQ96QU6 501 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 ZNF300Q96RE9 604 aaPredicted RBP2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 FUCA2Q9BTY2 467 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 NDUFAF3Q9BU61 184 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 POLR1EQ9GZS1 481 aaKnown RBP2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 RWDD1Q9H446 243 aaPredicted RBP2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 ACTR8Q9H981 624 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 COG4Q9H9E3 785 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 CENPMQ9NSP4 180 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 MED17Q9NVC6 651 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 CGNQ9P2M7 1197 aaKnown RBP2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 MIOXQ9UGB7 285 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 FOXJ3Q9UPW0 622 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 ATG4BQ9Y4P1 393 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 MAB21L2Q9Y586 359 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 FGD5Q6ZNL6 1462 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 STK36Q9NRP7 1315 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 SMCHD1A6NHR9 2005 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 SYNJ2BP-COX16A0A087WUM0 186 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 IGHV3-20A0A0C4DH32 117 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 A0A0U1RQV5 110 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 A0A1W2PR80 420 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 SHISA7A6NL88 538 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 YJEFN3A6XGL0 299 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 TCP10L2B9ZVM9 353 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 TLX2O43763 284 aaPredicted RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 KRT86O43790 486 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 KIAA0513O60268 411 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 ECE2O60344 883 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 VPS26AO75436 327 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 SCGB2A1O75556 95 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 MTRF1O75570 445 aaKnown RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 STK17BO94768 372 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 OPN1MWP04001 364 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 PROS1P07225 676 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 OPN1MW2P0DN77 364 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 OPN1MW3P0DN78 364 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 SNHG28P0DPA3 235 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 CALCBP10092 127 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 GNSP15586 552 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 GIFP27352 417 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 ADRA1AP35348 466 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 TRPC1P48995 793 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 HNMTP50135 292 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 CRYBA2P53672 197 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 KLF5Q13887 457 aaPredicted RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 KRT81Q14533 505 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 RBBP5Q15291 538 aaKnown RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 CARTPTQ16568 116 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 SHROOM1Q2M3G4 852 aaPredicted RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 ZNF718Q3SXZ3 478 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 ARHGEF16Q5VV41 709 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 RTL6Q6ICC9 239 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 FAM53AQ6NSI3 398 aaPredicted RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 CWC27Q6UX04 472 aaKnown RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 Q6ZRG5 221 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 TMEM26Q6ZUK4 368 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 GOLGA7Q7Z5G4 137 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 RANBP3LQ86VV4 465 aaPredicted RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 MISPQ8IVT2 679 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 ZNF397Q8NF99 534 aaPredicted RBP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 SELENOMQ8WWX9 145 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 TMEM37Q8WXS4 190 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 PHYHIPQ92561 330 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 SLCO2A1Q92959 643 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 ZBTB9Q96C00 473 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 ZNF416Q9BWM5 594 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 RAB11FIP5Q9BXF6 653 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 NDUFA13Q9P0J0 144 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 ERVK-18Q9QC07 812 aa2.87□□□□□ -1.95
RNU6-840P-201ENST00000517275 TBK1Q9UHD2 729 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms