RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 FAM166AQ6J272 317 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LCN10Q6JVE6 187 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC8EQ6NSJ5 796 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CES5AQ6NT32 575 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 C11orf63Q6NUN7 778 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 C8orf74Q6P047 294 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 DUS1LQ6P1R4 473 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 NIPAL3Q6P499 406 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 FUT10Q6P4F1 479 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CORO6Q6QEF8 472 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 DEGS2Q6QHC5 323 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CBLN3Q6UW01 205 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 PARM1Q6UWI2 310 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CWC27Q6UX04 472 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 DHRS13Q6UX07 377 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 BTNL8Q6UX41 500 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 METTL7BQ6UX53 244 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 UNQ6126/PRO20091Q6UXV3 157 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LINGO4Q6UY18 593 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 WASH2PQ6VEQ5 465 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 PACS1Q6VY07 963 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SCARA5Q6ZMJ2 495 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 Q6ZPB1 254 aaPredicted RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 QSOX2Q6ZRP7 698 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPRIN3Q6ZVF9 776 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCTD8Q6ZWB6 473 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CYP4V2Q6ZWL3 525 aaPredicted RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 USP43Q70EL4 1123 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF534Q76KX8 674 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRMT10CQ7L0Y3 403 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 EIF3MQ7L2H7 374 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 NLRP9Q7RTR0 991 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SSX9Q7RTT3 188 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKRD33Q7Z3H0 272 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SH2D6Q7Z4S9 175 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 BCDIN3DQ7Z5W3 292 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 VTCN1Q7Z7D3 282 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LHFPL4Q7Z7J7 247 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADGRD2Q7Z7M1 963 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SCD5Q86SK9 330 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 PATL1Q86TB9 770 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRUNE1Q86TP1 453 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 YRDCQ86U90 279 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 NOXA1Q86UR1 476 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERINC5Q86VE9 423 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC22A16Q86VW1 577 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TPRA1Q86W33 373 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZC3HC1Q86WB0 502 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 NUDT13Q86X67 352 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 COMMD2Q86X83 199 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ECHDC2Q86YB7 292 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TGIF2LXQ8IUE1 241 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 GRAMD2AQ8IUY3 354 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 NKAIN4Q8IVV8 208 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 MFSD6LQ8IWD5 586 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 DCUN1D3Q8IWE4 304 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 FOXRED2Q8IWF2 684 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SFTPA2Q8IWL1 248 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 STHQ8IWL8 128 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CD302Q8IX05 232 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC35F3Q8IY50 421 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 EFCAB13Q8IY85 973 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 KATNAL2Q8IYT4 538 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 UBQLNLQ8IYU4 475 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF683Q8IZ20 524 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ST13P4Q8IZP2 240 aaPredicted RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM9CQ8IZT9 166 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 RBFAQ8N0V3 343 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 KRT222Q8N1A0 295 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CRYBG2Q8N1P7 616 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 THEM5Q8N1Q8 247 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 PYROXD2Q8N2H3 581 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCAIMQ8N3R3 496 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRSS35Q8N3Z0 413 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 PARP16Q8N5Y8 322 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC5A8Q8N695 610 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CSGALNACT2Q8N6G5 542 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKRD13CQ8N6S4 541 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC17Q8N6Y2 441 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM217Q8N7C4 229 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LINC01465Q8N7H1 131 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM99Q8N816 258 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKFN1Q8N957 763 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TEX45Q8NA69 505 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 THAP8Q8NA92 274 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SYT14Q8NB59 555 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 COLGALT1Q8NBJ5 622 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF149Q8NC42 400 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 NOA1Q8NC60 698 aaKnown RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 DDHD1Q8NEL9 900 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRPV3Q8NET8 790 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CSNK2A3Q8NEV1 391 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ENGASEQ8NFI3 743 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 GJC3Q8NFK1 279 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 BPIFCQ8NFQ6 507 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CMASQ8NFW8 434 aaPredicted RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIM58Q8NG06 486 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR5D13Q8NGL4 314 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR8J1Q8NGP2 316 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms