RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ATG101Q9BSB4 218 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 LSG1Q9H089 658 aaKnown RBP2.94□□□□□ -1.94
LINC01088-211ENST00000515597 RAB9BQ9NP90 201 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 ZNF581Q9P0T4 197 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 VPS18Q9P253 973 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 PILRAQ9UKJ1 303 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 PCDHGA1Q9Y5H4 931 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 PIK3R4Q99570 1358 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 ADGRL2O95490 1459 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 ARHGEF5Q12774 1597 aa2.94□□□□□ -1.94
LINC01088-211ENST00000515597 CLIP1P30622 1438 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 DUOX2Q9NRD8 1548 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 ABCA3Q99758 1704 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 NWD2Q9ULI1 1742 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 SLC30A4O14863 429 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 TNFSF12O43508 249 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 SELENOFO60613 162 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 DLATP10515 647 aaKnown RBP2.93□□□□□ -1.94
LINC01088-211ENST00000515597 IER3P46695 156 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 SRPXP78539 464 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 CNTN1Q12860 1018 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 REG3GQ6UW15 175 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 Q6ZVQ6 151 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 RFPL4BQ6ZWI9 263 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 GALNTL5Q7Z4T8 443 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 C5orf24Q7Z6I8 188 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 DND1Q8IYX4 353 aaKnown RBP2.93□□□□□ -1.94
LINC01088-211ENST00000515597 ELMOD1Q8N336 334 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 RTL3Q8N8U3 475 aaKnown RBP2.93□□□□□ -1.94
LINC01088-211ENST00000515597 CKAP2Q8WWK9 683 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 SGF29Q96ES7 293 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 HNRNPABQ99729 332 aaKnown RBP2.93□□□□□ -1.94
LINC01088-211ENST00000515597 C5orf66Q9H5L9 145 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 KCNK13Q9HB14 408 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 IL1RAPQ9NPH3 570 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 SLCO1C1Q9NYB5 712 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 ARMCX3Q9UH62 379 aaPredicted RBP2.93□□□□□ -1.94
LINC01088-211ENST00000515597 CDH7Q9ULB5 785 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 PTPN23Q9H3S7 1636 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 EHBP1L1Q8N3D4 1523 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 TECPR2O15040 1411 aa2.93□□□□□ -1.94
LINC01088-211ENST00000515597 ADGRB2O60241 1585 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 SBF2Q86WG5 1849 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 OOEPA6NGQ2 149 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 K7EQG2 157 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 PDHXO00330 501 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 CTDSPLO15194 276 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 SIGLEC5O15389 551 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 SH3BGRLO75368 114 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 CLN5O75503 358 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 RAD51DO75771 328 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 RENP00797 406 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 CCND3P30281 292 aaPredicted RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 RPL9P32969 192 aaKnown RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 CRYBA2P53672 197 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 SIX1Q15475 284 aaPredicted RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 MLF2Q15773 248 aaPredicted RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 MPP7Q5T2T1 576 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 C9orf66Q5T8R8 295 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 AGAP7PQ5VUJ5 663 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 C17orf107Q6ZR85 190 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 Q71RC1 249 aaPredicted RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 SMIM5Q71RC9 77 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 GLRX5Q86SX6 157 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 ZC3H3Q8IXZ2 948 aaKnown RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 NHLRC2Q8NBF2 726 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 ATAD1Q8NBU5 361 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 CORO2AQ92828 525 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 PARK7Q99497 189 aaKnown RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 C17orf62Q9BQA9 187 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 MLPHQ9BV36 600 aaPredicted RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 IDI2Q9BXS1 227 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 MTIF3Q9H2K0 278 aaKnown RBP2.92□□□□□ -1.94
LINC01088-211ENST00000515597 ZWILCHQ9H900 591 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 VIPAS39Q9H9C1 493 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 TNFRSF19Q9NS68 423 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 GTF3C4Q9UKN8 822 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 AUP1Q9Y679 476 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 PAPPAQ13219 1627 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 PFASO15067 1338 aa2.92□□□□□ -1.94
LINC01088-211ENST00000515597 ARHGEF28Q8N1W1 1705 aaKnown RBP2.91□□□□□ -1.94
LINC01088-211ENST00000515597 IGKV6D-21A0A0A0MT36 114 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 IGHV3-16A0A0C4DH30 117 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 ZNF732B4DXR9 585 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 LMO7DNF2Z398 122 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 ST8SIA3O43173 380 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 SLU7O95391 586 aaKnown RBP2.91□□□□□ -1.94
LINC01088-211ENST00000515597 FCGR2BP31994 310 aaPredicted RBP2.91□□□□□ -1.94
LINC01088-211ENST00000515597 FCGR2CP31995 323 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 OR3A1P47881 315 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 RIDAP52758 137 aaKnown RBP2.91□□□□□ -1.94
LINC01088-211ENST00000515597 BTG1P62324 171 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 AKAP17AQ02040 695 aaKnown RBP2.91□□□□□ -1.94
LINC01088-211ENST00000515597 PRR30Q53SZ7 412 aaPredicted RBP2.91□□□□□ -1.94
LINC01088-211ENST00000515597 ZNF770Q6IQ21 691 aaPredicted RBP2.91□□□□□ -1.94
LINC01088-211ENST00000515597 Q6ZVH6 145 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 TMUB2Q71RG4 321 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 ZNF444Q8N0Y2 327 aaPredicted RBP2.91□□□□□ -1.94
LINC01088-211ENST00000515597 RNF149Q8NC42 400 aa2.91□□□□□ -1.94
LINC01088-211ENST00000515597 KIAA0895Q8NCT3 520 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms