RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 GPR65Q8IYL9 337 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 DNAJC5GQ8N7S2 189 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 AQP11Q8NBQ7 271 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 SELENOMQ8WWX9 145 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 GEMIN6Q8WXD5 167 aaKnown RBP12.24□□□□□ -0.45
SMAD1-215ENST00000515385 GTPBP3Q969Y2 492 aaKnown RBP12.24□□□□□ -0.45
SMAD1-215ENST00000515385 CHFRQ96EP1 664 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 FCRL1Q96LA6 429 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 COQ10AQ96MF6 247 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 P2RY12Q9H244 342 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 RC3H2Q9HBD1 1191 aaKnown RBP12.24□□□□□ -0.45
SMAD1-215ENST00000515385 ACER3Q9NUN7 267 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 RNF19AQ9NV58 838 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 BTNL2Q9UIR0 455 aa12.24□□□□□ -0.45
SMAD1-215ENST00000515385 TRDV1A0A1B0GX56 115 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 A8MXK9 166 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 SMAD6O43541 496 aaKnown RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 GADD45GO95257 159 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 SNAPINO95295 136 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 MOCS2O96007 188 aaPredicted RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 B3GALT4O96024 378 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 OSMP13725 252 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 BPIP17213 487 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 TACR1P25103 407 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 MC4RP32245 332 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 HNF1BP35680 557 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 XCR1P46094 333 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 WNT3P56703 355 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 RBBP4Q09028 425 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 LRRC74AQ0VAA2 488 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 RGNQ15493 299 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 NHLRC3Q5JS37 347 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 FAM209BQ5JX69 171 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 C12orf73Q69YU5 71 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 PSAPL1Q6NUJ1 521 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 CD200R1LQ6Q8B3 271 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 CASP12Q6UXS9 341 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 FGD2Q7Z6J4 655 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 PIANPQ8IYJ0 282 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 ZNF683Q8IZ20 524 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 WDR48Q8TAF3 677 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 RFT1Q96AA3 541 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 FOPNLQ96NB1 174 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 SYT17Q9BSW7 474 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 RDH14Q9HBH5 336 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 FLRT1Q9NZU1 646 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 KCMF1Q9P0J7 381 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 CPNE7Q9UBL6 633 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 MALT1Q9UDY8 824 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 PFDN2Q9UHV9 154 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 SF3B6Q9Y3B4 125 aaKnown RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 SPIN1Q9Y657 262 aaPredicted RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 GPR182O15218 404 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 GMDSO60547 372 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 CPSF4O95639 269 aaKnown RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 GUCA1CO95843 209 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 RHCEP18577 417 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 DGKAP23743 735 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 CDKN1CP49918 316 aaPredicted RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 WNT4P56705 351 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 YBEYP58557 167 aaPredicted RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 SERINC3Q13530 473 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 ZRANB3Q5FWF4 1079 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 CDKL4Q5MAI5 379 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 SLC25A30Q5SVS4 291 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 USP50Q70EL3 339 aaPredicted RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 LRRTM3Q86VH5 581 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 CLRN3Q8NCR9 226 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 OR8D4Q8NGM9 314 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 IL4I1Q96RQ9 567 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 RBCK1Q9BYM8 510 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 SPATC1LQ9H0A9 340 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 RGS17Q9UGC6 210 aaPredicted RBP12.23□□□□□ -0.45
SMAD1-215ENST00000515385 COPS3Q9UNS2 423 aa12.23□□□□□ -0.45
SMAD1-215ENST00000515385 TMEM129A0AVI4 362 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 H7C0S8 307 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 PRAMEF11O60813 436 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 MMP20O60882 483 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 RAMP2O60895 175 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 STK16O75716 305 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 LRATO95237 230 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 TP53P04637 393 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 SULT1A3P0DMM9 295 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 SULT1A4P0DMN0 295 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 COX7A2P14406 83 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 AMD1P17707 334 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 SLC6A4P31645 630 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 WDR5P61964 334 aaKnown RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 HEPACAMQ14CZ8 416 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 UGT8Q16880 541 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 Q3ZCU0 254 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 ANXA8L1Q5VT79 327 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 NOXRED1Q6NXP6 359 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 MOB2Q70IA6 237 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 ABI3BPQ7Z7G0 1075 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 SYT12Q8IV01 421 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 FBXO16Q8IX29 292 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 OR6C4Q8NGE1 309 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 NLNQ9BYT8 704 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms