RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 BARD1Q99728 777 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 WDR83Q9BRX9 315 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 FRMD8P1Q9BZ68 369 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 TWSG1Q9GZX9 223 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 CDC42EP4Q9H3Q1 356 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 KIR3DX1Q9H7L2 352 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 LRRC4CQ9HCJ2 640 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 MRPS30Q9NP92 439 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 TREX1Q9NSU2 369 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 INTS7Q9NVH2 962 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 NCKIPSDQ9NZQ3 722 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 SERTAD3Q9UJW9 196 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 PADI1Q9ULC6 663 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 PCDHGA1Q9Y5H4 931 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 LOC101059948A0A1B0GTJ6 334 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 RGSL1A5PLK6 1076 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 ZNF98A6NK75 572 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 RAD1O60671 282 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 B4GALT2O60909 372 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 WDR47O94967 919 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 ANPEPP15144 967 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 NCF2P19878 526 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 IVDP26440 423 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 EEF1A1P68104 462 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 GPLD1P80108 840 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 ABATP80404 500 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 EEF1A2Q05639 463 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 PFKFB4Q16877 469 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 CATSPEREQ5SY80 951 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 EEF1A1P5Q5VTE0 462 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 KIAA0930Q6ICG6 404 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 LCN10Q6JVE6 187 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 FIGLAQ6QHK4 219 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 ABRAXAS1Q6UWZ7 409 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 DBX2Q6ZNG2 339 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 KRT73Q86Y46 540 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 DLG3Q92796 817 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 UTP4Q969X6 686 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 MAGED4Q96JG8 741 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 TRIM54Q9BYV2 358 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 CCDC134Q9H6E4 229 aa7.51□□□□□ -1.21
LIMCH1-219ENST00000514096 B2RBV5 119 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 PDPK1O15530 556 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 CBSLP0DN79 551 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 PSKH1P11801 424 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 CBSP35520 551 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 OR3A3P47888 321 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 AGTR2P50052 363 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 AQP4P55087 323 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 CBLBQ13191 982 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ZIC1Q15915 447 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 FCRLBQ6BAA4 426 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 SLITRK4Q8IW52 837 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 RTP4Q96DX8 246 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 NDC1Q9BTX1 674 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ABCB10Q9NRK6 738 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 SIRT5Q9NXA8 310 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 NEUROG3Q9Y4Z2 214 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 TOR1BO14657 336 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 SPAG6O75602 509 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 KCNH1O95259 989 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 SIX3O95343 332 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 PLATP00750 562 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 CD63P08962 238 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 LIFP15018 202 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ITGA2P17301 1181 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ALOX12P18054 663 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 OGNP20774 298 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 AOAHP28039 575 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 PRKAR1BP31321 381 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 FASLGP48023 281 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 RAB28P51157 221 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 HSD11B2P80365 405 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 CDK16Q00536 496 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 PPA1Q15181 289 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ZFP69Q49AA0 526 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ATAD3BQ5T9A4 648 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 TEDDM1Q5T9Z0 273 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ADNP2Q6IQ32 1131 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 OGFOD3Q6PK18 319 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 MTDHQ86UE4 582 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 LRRC6Q86X45 466 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 GALNT12Q8IXK2 581 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ZCCHC7Q8N3Z6 543 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 OR1L3Q8NH93 324 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 NXNL1Q96CM4 212 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 TTYH2Q9BSA4 534 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ASPSCR1Q9BZE9 553 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 BRINP2Q9C0B6 783 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 RIBC2Q9H4K1 309 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 ELOVL6Q9H5J4 265 aa7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 PAQR5Q9NXK6 330 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.5□□□□□ -1.21
LIMCH1-219ENST00000514096 IQANK1A0A1B0GTG1 560 aa7.49□□□□□ -1.21
LIMCH1-219ENST00000514096 A0A1W2PPW3 197 aa7.49□□□□□ -1.21
LIMCH1-219ENST00000514096 TRIM49D1C9J1S8 452 aa7.49□□□□□ -1.21
LIMCH1-219ENST00000514096 ESR1P03372 595 aa7.49□□□□□ -1.21
LIMCH1-219ENST00000514096 THRAP10827 490 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms