RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 KLHL28Q9NXS3 571 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 CNIH4Q9P003 139 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 VTI1BQ9UEU0 232 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 CNOT11Q9UKZ1 510 aaKnown RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 CHCHD2Q9Y6H1 151 aaPredicted RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 BTNL10A8MVZ5 291 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 RNF223E7ERA6 249 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 CYR61O00622 381 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 WIPF1O43516 503 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 CTNSO60931 367 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 LDB3O75112 727 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 ACSL3O95573 720 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 FTCDO95954 541 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 C1QAP02745 245 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 TP53P04637 393 aaPredicted RBP9.59□□□□□ -0.87
CLDND1-227ENST00000513452 SOX18P35713 384 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 CDK9P50750 372 aaKnown RBP9.59□□□□□ -0.87
CLDND1-227ENST00000513452 PLA2G16P53816 162 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 LIM2P55344 173 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 ID2Q02363 134 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 DHX34Q14147 1143 aaKnown RBP9.59□□□□□ -0.87
CLDND1-227ENST00000513452 CAPRIN1Q14444 709 aaKnown RBP9.59□□□□□ -0.87
CLDND1-227ENST00000513452 TOMM20Q15388 145 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 PLXDC2Q6UX71 529 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 HIPK1Q86Z02 1210 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 KLHDC8AQ8IYD2 350 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 GCNT2Q8N0V5 402 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 NUBPLQ8TB37 319 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF721Q8TF20 911 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 SLC44A1Q8WWI5 657 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF669Q96BR6 464 aaPredicted RBP9.59□□□□□ -0.87
CLDND1-227ENST00000513452 INTS12Q96CB8 462 aaKnown RBP9.59□□□□□ -0.87
CLDND1-227ENST00000513452 MS4A6EQ96DS6 147 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 LINGO1Q96FE5 620 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 WFIKKN1Q96NZ8 548 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 NDNQ99608 321 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 MED18Q9BUE0 208 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 PELI2Q9HAT8 420 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 YAE1D1Q9NRH1 226 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF226Q9NYT6 803 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 DYRK1BQ9Y463 629 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 WIF1Q9Y5W5 379 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 COMMD10Q9Y6G5 202 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 DOCK7Q96N67 2140 aa9.59□□□□□ -0.87
CLDND1-227ENST00000513452 A0A087X1B8 175 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 A0A088AWK7 358 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 MIF4GDA9UHW6 222 aaKnown RBP9.58□□□□□ -0.88
CLDND1-227ENST00000513452 TRIM3O75382 744 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-227ENST00000513452 GUCA1CO95843 209 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 HPNP05981 417 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 CYP4B1P13584 511 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 ZNF10P21506 573 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-227ENST00000513452 CRYGSP22914 178 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 MC3RP41968 323 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 MSH2P43246 934 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 SLCO1A2P46721 670 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 MASP1P48740 699 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 TERF1P54274 439 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 DIO3P55073 304 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 ATP5J2P56134 94 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 VEZF1Q14119 521 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 RCN2Q14257 317 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 EFTUD2Q15029 972 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLDND1-227ENST00000513452 KCTD19Q17RG1 926 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-227ENST00000513452 KRTAP24-1Q3LI83 254 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 EIPR1Q53HC9 387 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 WIPI1Q5MNZ9 446 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-227ENST00000513452 BICRALQ6AI39 1079 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 UGT3A1Q6NUS8 523 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 NXPE4Q6UWF7 544 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 PLEKHM3Q6ZWE6 761 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 CCDC170Q8IYT3 715 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 TMEM171Q8WVE6 324 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 DIO2Q92813 273 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 FBXL8Q96CD0 374 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 QRFPRQ96P65 431 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 GAL3ST4Q96RP7 486 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 TM9SF2Q99805 663 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 TUBA1CQ9BQE3 449 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 FRMD8P1Q9BZ68 369 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-227ENST00000513452 TSGA10Q9BZW7 698 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 PIGMQ9H3S5 423 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 PACSIN3Q9UKS6 424 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 DAPP1Q9UN19 280 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 C15orf41Q9Y2V0 281 aa9.58□□□□□ -0.88
CLDND1-227ENST00000513452 RAI1Q7Z5J4 1906 aaPredicted RBP9.57□□□□□ -0.88
CLDND1-227ENST00000513452 DSCAMO60469 2012 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 TCRBV7S3A2A0A539 114 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 LRIT2A6NDA9 550 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 A8MXE2 369 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 HAUS5O94927 633 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 SOX30O94993 753 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 FBXO45P0C2W1 286 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 COX7A2P14406 83 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 SERPINB3P29508 390 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 RPL21P46778 160 aaKnown RBP9.57□□□□□ -0.88
CLDND1-227ENST00000513452 AP1S2P56377 157 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 TIAL1Q01085 375 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLDND1-227ENST00000513452 FAM27E3Q08E93 113 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms