RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 GATA5Q9BWX5 397 aaPredicted RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 DEFB126Q9BYW3 111 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 ACPTQ9BZG2 426 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 OR8D2Q9GZM6 311 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 BRF2Q9HAW0 419 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 VTI1BQ9UEU0 232 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 MID2Q9UJV3 735 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 ZNF223Q9UK11 482 aaPredicted RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 NTNG1Q9Y2I2 539 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 CLCA3PQ9Y6N3 262 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 A0A1W2PS29 197 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 OR5H15A6NDH6 313 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 GABRR3A8MPY1 467 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 C17orf105B2RV13 164 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 PGRMC2O15173 223 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 PRKNO60260 465 aaPredicted RBP13.03□□□□□ -0.32
DDX41-212ENST00000511040 MAPK12P53778 367 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 BTKQ06187 659 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 CSTF3Q12996 717 aaKnown RBP13.03□□□□□ -0.32
DDX41-212ENST00000511040 TERF2Q15554 542 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 C16orf47Q6ZP98 133 aaPredicted RBP13.03□□□□□ -0.32
DDX41-212ENST00000511040 DGAT2L6Q6ZPD8 337 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 PAGE2Q7Z2X7 111 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
DDX41-212ENST00000511040 TMEM132CQ8N3T6 1108 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 VMP1Q96GC9 406 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 DGAT2Q96PD7 388 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 LIN28AQ9H9Z2 209 aaKnown RBP13.03□□□□□ -0.32
DDX41-212ENST00000511040 WDR41Q9HAD4 459 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 ASF1BQ9NVP2 202 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 VPS29Q9UBQ0 182 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 ADAM29Q9UKF5 820 aa13.03□□□□□ -0.32
DDX41-212ENST00000511040 COPG1Q9Y678 874 aaKnown RBP13.03□□□□□ -0.32
DDX41-212ENST00000511040 TRAV17A0A0B4J275 112 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 HRKO00198 91 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 TRIM13O60858 407 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 GPR75O95800 540 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 DDAH2O95865 285 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 HSD3B1P14060 373 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 HSD3B2P26439 372 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 CD96P40200 585 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 STT3AP46977 705 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 UQCRFS1P47985 274 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 CLCN2P51788 898 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 GPR143P51810 404 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 MLF1P58340 268 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 IGLV3-21P80748 117 aaPredicted RBP13.02□□□□□ -0.33
DDX41-212ENST00000511040 OC90Q02509 493 aaPredicted RBP13.02□□□□□ -0.33
DDX41-212ENST00000511040 KCNC4Q03721 635 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 SRSF11Q05519 484 aaKnown RBP13.02□□□□□ -0.33
DDX41-212ENST00000511040 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 NDUFAF5Q5TEU4 345 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 ZNF468Q5VIY5 522 aaPredicted RBP13.02□□□□□ -0.33
DDX41-212ENST00000511040 CLEC6AQ6EIG7 209 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 OR52E8Q6IFG1 317 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 TUBA3EQ6PEY2 450 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 ZCCHC23Q6ZST2 131 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 OR14A16Q8NHC5 309 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 SLC2A12Q8TD20 617 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 CHTF18Q8WVB6 975 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 DAZLQ92904 295 aaKnown RBP13.02□□□□□ -0.33
DDX41-212ENST00000511040 APIPQ96GX9 242 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 UTP23Q9BRU9 249 aaKnown RBP13.02□□□□□ -0.33
DDX41-212ENST00000511040 RNF32Q9H0A6 362 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 KLHL1Q9NR64 748 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 NMRK1Q9NWW6 199 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 ABI3Q9P2A4 366 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 PPIEQ9UNP9 301 aaKnown RBP13.02□□□□□ -0.33
DDX41-212ENST00000511040 FIS1Q9Y3D6 152 aa13.02□□□□□ -0.33
DDX41-212ENST00000511040 CCDC151A5D8V7 595 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 TYROBPO43914 113 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 OR10H2O60403 315 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 PRAMEF2O60811 474 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 ALOX15P16050 662 aaPredicted RBP13.01□□□□□ -0.33
DDX41-212ENST00000511040 GNLYP22749 145 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 NAA20P61599 178 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 RAE1P78406 368 aaKnown RBP13.01□□□□□ -0.33
DDX41-212ENST00000511040 PLIN5Q00G26 463 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 OR1C1Q15619 314 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 ZNF750Q32MQ0 723 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 SPDYAQ5MJ70 313 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 SPINK14Q6IE38 97 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 ATCAYQ86WG3 371 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 GBP7Q8N8V2 638 aaPredicted RBP13.01□□□□□ -0.33
DDX41-212ENST00000511040 MORN4Q8NDC4 146 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 GRHL3Q8TE85 626 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 TM4SF18Q96CE8 201 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 RBM18Q96H35 190 aaKnown RBP13.01□□□□□ -0.33
DDX41-212ENST00000511040 EBPLQ9BY08 206 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 HES7Q9BYE0 225 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 PTGDR2Q9Y5Y4 395 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 SHANK1Q9Y566 2161 aa13.01□□□□□ -0.33
DDX41-212ENST00000511040 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
DDX41-212ENST00000511040 NBASA2RRP1 2371 aa13□□□□□ -0.33
DDX41-212ENST00000511040 TCP11X1B4DZS4 312 aa13□□□□□ -0.33
DDX41-212ENST00000511040 PCDH7O60245 1069 aa13□□□□□ -0.33
DDX41-212ENST00000511040 VPS4BO75351 444 aa13□□□□□ -0.33
DDX41-212ENST00000511040 ZFAND5O76080 213 aa13□□□□□ -0.33
DDX41-212ENST00000511040 CHRNGP07510 517 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms