RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 FAM58BPP0C7Q3 252 aa17.35■□□□□ 0.37
UBE3D-207ENST00000509102 RNF224P0DH78 156 aa17.35■□□□□ 0.37
UBE3D-207ENST00000509102 FOLH1Q04609 750 aa17.35■□□□□ 0.37
UBE3D-207ENST00000509102 ANKRD9Q96BM1 317 aaPredicted RBP17.35■□□□□ 0.37
UBE3D-207ENST00000509102 GPR137Q96N19 417 aa17.35■□□□□ 0.37
UBE3D-207ENST00000509102 ZNF223Q9UK11 482 aaPredicted RBP17.35■□□□□ 0.37
UBE3D-207ENST00000509102 ATG4BQ9Y4P1 393 aa17.35■□□□□ 0.37
UBE3D-207ENST00000509102 UTP20O75691 2785 aaKnown RBP17.35■□□□□ 0.37
UBE3D-207ENST00000509102 ZGRF1Q86YA3 2104 aa17.35■□□□□ 0.37
UBE3D-207ENST00000509102 A0A0A6YYD5 115 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 A8MT66 165 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 NPIPA5E9PKD4 350 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 PROM1O43490 865 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 GUCY1B2O75343 617 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 GSTA1P08263 222 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 FAM153BP0C7A2 387 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 ALOX15P16050 662 aaPredicted RBP17.34■□□□□ 0.37
UBE3D-207ENST00000509102 BSGP35613 385 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 HNRNPH2P55795 449 aaKnown RBP17.34■□□□□ 0.37
UBE3D-207ENST00000509102 HERVK_113P63132 956 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 IGLV3-21P80748 117 aaPredicted RBP17.34■□□□□ 0.37
UBE3D-207ENST00000509102 TRAF3Q13114 568 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 FAM153CQ494X1 144 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 C18orf63Q68DL7 685 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 SLC22A9Q8IVM8 553 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 OR4N5Q8IXE1 308 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 ST13P4Q8IZP2 240 aaPredicted RBP17.34■□□□□ 0.37
UBE3D-207ENST00000509102 MYRIPQ8NFW9 859 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 OR4F6Q8NGB9 312 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 ZNF483Q8TF39 744 aaPredicted RBP17.34■□□□□ 0.37
UBE3D-207ENST00000509102 RELTQ969Z4 430 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 NSUN5Q96P11 429 aaKnown RBP17.34■□□□□ 0.37
UBE3D-207ENST00000509102 C1QTNF3Q9BXJ4 246 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 ERVK-6Q9BXR3 956 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 ZBTB26Q9HCK0 441 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 NPIPA1Q9UND3 350 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 ICE1Q9Y2F5 2266 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 STK38LQ9Y2H1 464 aa17.34■□□□□ 0.37
UBE3D-207ENST00000509102 WWP2O00308 870 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 TFECO14948 347 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-207ENST00000509102 SLC19A2O60779 497 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 EEDO75530 441 aaKnown RBP17.33■□□□□ 0.36
UBE3D-207ENST00000509102 SUPT7LO94864 414 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 GPR75O95800 540 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 GCAP28676 217 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 RNF4P78317 190 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 SGO1Q5FBB7 561 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 C6orf163Q5TEZ5 329 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 OR52E8Q6IFG1 317 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 OPN5Q6U736 354 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 GHDCQ8N2G8 530 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 CPSF7Q8N684 471 aaKnown RBP17.33■□□□□ 0.36
UBE3D-207ENST00000509102 UBLCP1Q8WVY7 318 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-207ENST00000509102 SELENOMQ8WWX9 145 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 TSPAN10Q9H1Z9 355 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-207ENST00000509102 PPCSQ9HAB8 311 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 TBK1Q9UHD2 729 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 ADAM29Q9UKF5 820 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 SLC12A4Q9UP95 1085 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 ASB4Q9Y574 426 aa17.33■□□□□ 0.36
UBE3D-207ENST00000509102 CCDC151A5D8V7 595 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 CCL21O00585 134 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 ASNA1O43681 348 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 PEX1O43933 1283 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 TMPRSS11DO60235 418 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 ETHE1O95571 254 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 ATP5F1P24539 256 aaPredicted RBP17.32■□□□□ 0.36
UBE3D-207ENST00000509102 CA7P43166 264 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 MEOX1P50221 254 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 HK2P52789 917 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 CDH13P55290 713 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 CLCQ05315 142 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 RASA2Q15283 850 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 CCNYL2Q5T2Q4 361 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 MRM1Q6IN84 353 aaKnown RBP17.32■□□□□ 0.36
UBE3D-207ENST00000509102 IL20RBQ6UXL0 311 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 SLC22A8Q8TCC7 542 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 TRPC4APQ8TEL6 797 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBE3D-207ENST00000509102 RIT1Q92963 219 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 SENP5Q96HI0 755 aaPredicted RBP17.32■□□□□ 0.36
UBE3D-207ENST00000509102 FBXL20Q96IG2 436 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 RASL10BQ96S79 203 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 CNPPD1Q9BV87 410 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 ZNF717Q9BY31 904 aaPredicted RBP17.32■□□□□ 0.36
UBE3D-207ENST00000509102 BRF2Q9HAW0 419 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 RYDENQ9NUL5 291 aaKnown RBP17.32■□□□□ 0.36
UBE3D-207ENST00000509102 TMEM216Q9P0N5 145 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 TRPS1Q9UHF7 1281 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 DCDC2Q9UHG0 476 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 SH3BGRL2Q9UJC5 107 aa17.32■□□□□ 0.36
UBE3D-207ENST00000509102 MAST4O15021 2626 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 A0A1W2PR48 441 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 GLOD5A6NK44 160 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 GOLGA8RI6L899 631 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 PRKNO60260 465 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-207ENST00000509102 ZG16O60844 167 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 AIFM1O95831 613 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 KRT6AP02538 564 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 GBAP04062 536 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms