RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 DLG2Q15700 870 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MEP1AQ16819 746 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PNLIPRP3Q17RR3 467 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZIK1Q3SY52 487 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 AKIRIN2Q53H80 203 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 SMUG1Q53HV7 270 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CXorf66Q5JRM2 361 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 EFHC1Q5JVL4 640 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CEP85LQ5SZL2 805 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 GRTP1Q5TC63 336 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 DCAF12L2Q5VW00 463 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZSCAN25Q6NSZ9 544 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RHBDD2Q6NTF9 364 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 NIPAL3Q6P499 406 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RNASEKQ6P5S7 137 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TTC33Q6PID6 262 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM107Q6UX40 140 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 COPS6Q7L5N1 327 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 BCDIN3DQ7Z5W3 292 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 WDR5BQ86VZ2 330 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MEX3DQ86XN8 651 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 VRK2Q86Y07 508 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TDRPQ86YL5 185 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CHERPQ8IWX8 916 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 LRRC34Q8IZ02 419 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 DSELQ8IZU8 1212 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 GABRG1Q8N1C3 465 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 COLGALT1Q8NBJ5 622 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PAPD5Q8NDF8 572 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 OSR1Q8TAX0 266 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TEX47Q8TBZ9 253 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RAET1EQ8TD07 263 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 GRHL3Q8TE85 626 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CLEC4CQ8WTT0 213 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 SEMA4DQ92854 862 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PABPC5Q96DU9 382 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 OTUB1Q96FW1 271 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TRMT61AQ96FX7 289 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 C16orf58Q96GQ5 468 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PLEKHA8Q96JA3 519 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF479Q96JC4 524 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZBTB45Q96K62 511 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 LMLNQ96KR4 655 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCDC17Q96LX7 622 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MUS81Q96NY9 551 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 FYTTD1Q96QD9 318 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TGS1Q96RS0 853 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 NPY6RQ99463 290 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 FEVQ99581 238 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 NAPGQ99747 312 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RBM4BQ9BQ04 359 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF559Q9BR84 538 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCM2Q9BSQ5 444 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 C20orf24Q9BUV8 137 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MRPL13Q9BYD1 178 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 NUF2Q9BZD4 464 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM39BQ9GZU3 492 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 WWP1Q9H0M0 922 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MED20Q9H944 212 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MARCH7Q9H992 704 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MRM3Q9HC36 420 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CSNK1G1Q9HCP0 422 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 GPR173Q9NS66 373 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ACOXLQ9NUZ1 547 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MED17Q9NVC6 651 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RDH8Q9NYR8 311 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 USE1Q9NZ43 259 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CD274Q9NZQ7 290 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF490Q9ULM2 529 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TBC1D24Q9ULP9 559 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 EXOGQ9Y2C4 368 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PRG3Q9Y2Y8 225 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 WDR45Q9Y484 360 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 NFE2L3Q9Y4A8 694 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 NME7Q9Y5B8 376 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF541Q9H0D2 1346 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 LOC105371242A0A075B767 164 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 BTBD19C9JJ37 291 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 KLRF2D3W0D1 207 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 E5RI56 91 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 H3BNX3 289 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ABCD4O14678 606 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 LIN7AO14910 233 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ARPC3O15145 178 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC16A5O15375 505 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 AP5Z1O43299 807 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 TRAPPC3O43617 180 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 DUX1O43812 170 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 KLK8O60259 260 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 N4BP1O75113 896 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 AP2A2O94973 939 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 OAZ2O95190 189 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 NFATC1O95644 943 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 CPNE6O95741 557 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 PGK1P00558 417 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 IL6P05231 212 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 FCER2P06734 321 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ERCC1P07992 297 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCL2P13500 99 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 AKR1A1P14550 325 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms