RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TRIM64A6NGJ6 449 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 ANKDD1BA6NHY2 528 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 TRIM64BA6NI03 449 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 FAM171A2A8MVW0 826 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 EIF3FO00303 357 aaPredicted RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 CASKO14936 926 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 ARHGEF9O43307 516 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 HCN1O60741 890 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SMPD2O60906 423 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 H2AFYO75367 372 aaKnown RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 WDR47O94967 919 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 ACSL3O95573 720 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 KRT14P02533 472 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SERPINA6P08185 405 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SMIM10L1P0DMW3 83 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 EPXP11678 715 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 CXCR5P32302 372 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 PEX19P40855 299 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 GDF5P43026 501 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 MSH2P43246 934 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 ZNF75DP51815 510 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 HSD17B7P56937 341 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 TIAL1Q01085 375 aaKnown RBP eCLIP5.3□□□□□ -1.56
GYPB-208ENST00000507009 FOXO1Q12778 655 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SLBPQ14493 270 aaKnown RBP eCLIP5.3□□□□□ -1.56
GYPB-208ENST00000507009 SIX1Q15475 284 aaPredicted RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 TERF2Q15554 542 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 C18orf21Q32NC0 220 aaPredicted RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 SHEQ5VZ18 495 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SLC22A10Q63ZE4 541 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 TRIM40Q6P9F5 258 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 PLXDC2Q6UX71 529 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 TMEM64Q6YI46 380 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SLCO4C1Q6ZQN7 724 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 CXXC5Q7LFL8 322 aaKnown RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 KIF18BQ86Y91 864 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 KRTAP1-3Q8IUG1 177 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 OR4N5Q8IXE1 308 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 ZNF595Q8IYB9 648 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 TXLNBQ8N3L3 684 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 FBXW8Q8N3Y1 598 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 GOLM1Q8NBJ4 401 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 MORN4Q8NDC4 146 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 OR5L2Q8NGL0 311 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 GABPB2Q8TAK5 448 aaPredicted RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 NEIL3Q8TAT5 605 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SLC22A8Q8TCC7 542 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 PTPMT1Q8WUK0 201 aaPredicted RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 GAL3ST3Q96A11 431 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 PPWD1Q96BP3 646 aaKnown RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 FBXL8Q96CD0 374 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 MS4A6EQ96DS6 147 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 HSPBAP1Q96EW2 488 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 PERPQ96FX8 193 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SMIM10Q96HG1 83 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 GAL3ST4Q96RP7 486 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 DOHHQ9BU89 302 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 SARGQ9BW04 601 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 ZNF703Q9H7S9 590 aaPredicted RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 PLEKHF2Q9H8W4 249 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 UBTD1Q9HAC8 227 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 PELI2Q9HAT8 420 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 PPANQ9NQ55 473 aaKnown RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 COPS7AQ9UBW8 275 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 EIF3LQ9Y262 564 aaKnown RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 SLC6A5Q9Y345 797 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 MPDZO75970 2070 aa5.3□□□□□ -1.56
GYPB-208ENST00000507009 NSD1Q96L73 2696 aaPredicted RBP5.3□□□□□ -1.56
GYPB-208ENST00000507009 FREM3P0C091 2139 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 A0A088AWK7 358 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 MAGEB16A2A368 324 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 SH3D21A4FU49 640 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 NCF1BA6NI72 391 aaPredicted RBP5.29□□□□□ -1.56
GYPB-208ENST00000507009 LRRC3CA6NJW4 275 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 POM121CA8CG34 1229 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 NCF1CA8MVU1 366 aaPredicted RBP5.29□□□□□ -1.56
GYPB-208ENST00000507009 HRKO00198 91 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 CDC7O00311 574 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 SAP18O00422 153 aaKnown RBP5.29□□□□□ -1.56
GYPB-208ENST00000507009 CES2O00748 559 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 CTNSO60931 367 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 ERN1O75460 977 aaKnown RBP5.29□□□□□ -1.56
GYPB-208ENST00000507009 BANF1O75531 89 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 ETHE1O95571 254 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 EPPINO95925 133 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 TMIGD3P0DMS9 266 aaPredicted RBP5.29□□□□□ -1.56
GYPB-208ENST00000507009 C1GALT1C1LP0DN25 315 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 COX7A2P14406 83 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 NCF1P14598 390 aaPredicted RBP5.29□□□□□ -1.56
GYPB-208ENST00000507009 ZNF10P21506 573 aaPredicted RBP5.29□□□□□ -1.56
GYPB-208ENST00000507009 CPOXP36551 454 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 MASP1P48740 699 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 ZNF136P52737 540 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 MTTPP55157 894 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 LIM2P55344 173 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 AP1S2P56377 157 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 SRYQ05066 204 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 DUSP8Q13202 625 aa5.29□□□□□ -1.56
GYPB-208ENST00000507009 DAZAP2Q15038 168 aaPredicted RBP5.29□□□□□ -1.56
GYPB-208ENST00000507009 FBXO48Q5FWF7 155 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms