RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 LIPJQ5W064 366 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 CASP12Q6UXS9 341 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 ANKS3Q6ZW76 656 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 NXPE1Q8N323 547 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 OR52I1Q8NGK6 324 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 TM9SF4Q92544 642 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 MTERF3Q96E29 417 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 ZSCAN5AQ9BUG6 496 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 GLYATL1P3A0A0U1RQE8 302 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 ISM1B1AKI9 464 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 C8GP07360 202 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 HIST1H2AGP0C0S8 130 aaPredicted RBP16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 BPIP17213 487 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 HIST1H2ADP20671 130 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 CCR7P32248 378 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 TALDO1P37837 337 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 GSTM5P46439 218 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 IL18Q14116 193 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 HEPACAMQ14CZ8 416 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 TMEM107Q6UX40 140 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 TCEANCQ8N8B7 351 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 TOR1AIP2Q8NFQ8 470 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 ASB11Q8WXH4 323 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 C1GALT1C1Q96EU7 318 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 HIST1H2AHQ96KK5 128 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 HIST1H2AJQ99878 128 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 C19orf43Q9BQ61 176 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 H2AFJQ9BTM1 129 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 SLC28A3Q9HAS3 691 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 FOLH1BQ9HBA9 442 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 ZFP64Q9NPA5 681 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 TESQ9UGI8 421 aaKnown RBP16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 ING4Q9UNL4 249 aa16.29■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 C2orf78A6NCI8 922 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 SMAD6O43541 496 aaKnown RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 TSPAN9O75954 239 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 RAB36O95755 333 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 RAF1P04049 648 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 IFNW1P05000 195 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 TPOP07202 933 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ANXA4P09525 319 aaPredicted RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 FGF9P31371 208 aaPredicted RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ETV3P41162 512 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 SOX9P48436 509 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 WDR5P61964 334 aaKnown RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF177Q13360 481 aaPredicted RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 TPBGQ13641 420 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 MRPL58Q14197 206 aaKnown RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 GPR33Q49SQ1 333 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 CRTC2Q53ET0 693 aaPredicted RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ARMC12Q5T9G4 340 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF431Q8TF32 576 aaPredicted RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 MYO19Q96H55 970 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 SLC35A5Q9BS91 424 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 NT5DC2Q9H857 520 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 EXO1Q9UQ84 846 aaKnown RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 PCDHB7Q9Y5E2 793 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 KIAA1671Q9BY89 1806 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 A0A0U1RQF3 1178 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 SLC30A4O14863 429 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 UGDHO60701 494 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ETHE1O95571 254 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ZDHHC11BP0C7U3 371 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 WEE1P30291 646 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 NSG1P42857 185 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 XKP51811 444 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 LIM2P55344 173 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 WNT4P56705 351 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 PFN3P60673 137 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 IRF8Q02556 426 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF385BQ569K4 471 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 RNF219Q5W0B1 726 aaPredicted RBP16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 KIF18BQ86Y91 864 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 TIGD4Q8IY51 512 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 OXR1Q8N573 874 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 LHFPL5Q8TAF8 219 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 ATF6BQ99941 703 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 MGAT4AQ9UM21 535 aa16.28■□□□□ 0.2
SQSTM1-211ENST00000506690 A0A0A6YYJ9 748 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 CIB4A0PJX0 185 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 LRRTM2O43300 516 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 B4GALT3O60512 393 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 HLA-FP30511 346 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 SLC11A2P49281 568 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 DDX39BQ13838 428 aaKnown RBP16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 KCNC3Q14003 757 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 SEC23BQ15437 767 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 FCN2Q15485 313 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 CDKN3Q16667 212 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF630Q2M218 657 aaPredicted RBP16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 BICRALQ6AI39 1079 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 HDDC2Q7Z4H3 204 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 UCN3Q969E3 161 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 TM9SF2Q99805 663 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 P2RY13Q9BPV8 354 aa16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 BHLHE41Q9C0J9 482 aaPredicted RBP16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 RANBP3Q9H6Z4 567 aaPredicted RBP16.27■□□□□ 0.2
SQSTM1-211ENST00000506690 EVA1BQ9NVM1 165 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms