RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SBK3P0C264 359 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 ESRRAP11474 423 aaPredicted RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 MAGEA12P43365 314 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 SMSP52788 366 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 RPS13P62277 151 aaKnown RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 SLAMF1Q13291 335 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 NAB1Q13506 487 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 UAP1Q16222 522 aaPredicted RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 ZNF750Q32MQ0 723 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 EMC4Q5J8M3 183 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 DEPDC1Q5TB30 811 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 C8orf74Q6P047 294 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 LYPD8Q6UX82 237 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 IL20RBQ6UXL0 311 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 GOLGA7Q7Z5G4 137 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 C9orf40Q8IXQ3 194 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 ZFP62Q8NB50 900 aaPredicted RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 ARMC2Q8NEN0 867 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 OR52B6Q8NGF0 335 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 C16orf52Q8NHV5 167 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 RHEBL1Q8TAI7 183 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 SLC2A12Q8TD20 617 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 MAGED4Q96JG8 741 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 SCYL1Q96KG9 808 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 FOXC2Q99958 501 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 TBCDQ9BTW9 1192 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 OR8D2Q9GZM6 311 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 CXXC4Q9H2H0 198 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 CDC42EP4Q9H3Q1 356 aaKnown RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 ACSS3Q9H6R3 686 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 COPS7BQ9H9Q2 264 aaPredicted RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 ZBTB26Q9HCK0 441 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 SEMA4BQ9NPR2 832 aaPredicted RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 MYOTQ9UBF9 498 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 RNF11Q9Y3C5 154 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 LIPGQ9Y5X9 500 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 VPS13CQ709C8 3753 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 ATRQ13535 2644 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 A0A087X1B8 175 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 FAM166BA8MTA8 275 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 PPP6CO00743 305 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 CLDN4O14493 209 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 FCHO1O14526 889 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 ZFAND5O76080 213 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 PDE9AO76083 593 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 KLHL2O95198 593 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 GBAP04062 536 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 IGKV3-11P04433 115 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 CELA3AP09093 270 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 MYBL2P10244 700 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 BSGP35613 385 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 SSR2P43308 183 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 SSR4P51571 173 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 RNF4P78317 190 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 ILF2Q12905 390 aaKnown RBP12.16□□□□□ -0.46
DDX41-204ENST00000504807 LAPTM5Q13571 262 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 KRTCAP3Q53RY4 240 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 PAGE2BQ5JRK9 111 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 OR4C11Q6IEV9 310 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 TMEM200AQ86VY9 491 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 GHDCQ8N2G8 530 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 TMEM156Q8N614 296 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 HORMAD2Q8N7B1 307 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 LRRN4CLQ8ND94 238 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 PSD4Q8NDX1 1056 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 UHMK1Q8TAS1 419 aaKnown RBP12.16□□□□□ -0.46
DDX41-204ENST00000504807 WDR20Q8TBZ3 569 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 ISL2Q96A47 359 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 FUT8Q9BYC5 575 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 PLSCR2Q9NRY7 297 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
DDX41-204ENST00000504807 CPSF2Q9P2I0 782 aaKnown RBP12.16□□□□□ -0.46
DDX41-204ENST00000504807 TNFRSF10DQ9UBN6 386 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 KLF13Q9Y2Y9 288 aaPredicted RBP12.16□□□□□ -0.46
DDX41-204ENST00000504807 YARS2Q9Y2Z4 477 aaKnown RBP12.16□□□□□ -0.46
DDX41-204ENST00000504807 ASB4Q9Y574 426 aa12.16□□□□□ -0.46
DDX41-204ENST00000504807 FBN1P35555 2871 aaKnown RBP12.16□□□□□ -0.46
DDX41-204ENST00000504807 A0A0A6YYD5 115 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 A0A1W2PR48 441 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 GLOD5A6NK44 160 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 URI1O94763 535 aaPredicted RBP12.15□□□□□ -0.46
DDX41-204ENST00000504807 ACSL3O95573 720 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 CCL3P10147 92 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 EPB42P16452 691 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 AGAP20933 346 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 CPN2P22792 545 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 GCAP28676 217 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 ALDH18A1P54886 795 aaKnown RBP12.15□□□□□ -0.46
DDX41-204ENST00000504807 TNFRSF17Q02223 184 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 FOLH1Q04609 750 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 RBPJQ06330 500 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 GTF2H2Q13888 395 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 ACAP2Q15057 778 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 PCBP2Q15366 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDX41-204ENST00000504807 HIST2H2ACQ16777 129 aaPredicted RBP12.15□□□□□ -0.46
DDX41-204ENST00000504807 TMEM35AQ53FP2 167 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 TMEM198Q66K66 360 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 HIST2H2AA3Q6FI13 130 aa12.15□□□□□ -0.46
DDX41-204ENST00000504807 MRM1Q6IN84 353 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms