RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 COQ10AQ96MF6 247 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PIGMQ9H3S5 423 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DHX35Q9H5Z1 703 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SACM1LQ9NTJ5 587 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HCN3Q9P1Z3 774 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CDV3Q9UKY7 258 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 KCNIP3Q9Y2W7 256 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PMF1-BGLAPU3KQ54 211 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IGKV3D-11A0A0A0MRZ8 115 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 UBE2QL1A1L167 161 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 OR2A25A4D2G3 310 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 PRR23D1E9PI22 279 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 E2F3O00716 465 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SOCS2O14508 198 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 PRAMEF4O60810 478 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SLC22A3O75751 556 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 KCNK2O95069 426 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 HTR3BO95264 441 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 LYPD3O95274 346 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 CST3P01034 146 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ANKRD34CP0C6C1 535 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 PRR23D2P0DMB1 279 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 GJA1P17302 382 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FDXRP22570 491 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SPAM1P38567 509 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 RGS6P49758 472 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 BAATQ14032 418 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 MAD2L1BPQ15013 274 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 GUSBP1Q15486 140 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ZIC1Q15915 447 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ATP13A4Q4VNC1 1196 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 IGSF11Q5DX21 431 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF691Q5VV52 312 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 PRAMEF9Q5VWM5 478 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FAM198BQ6UWH4 519 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 C5orf46Q6UWT4 87 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 TFAP2EQ6VUC0 442 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ZC3HC1Q86WB0 502 aaKnown RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 OSTM1Q86WC4 334 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SLC35F3Q8IY50 421 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FSTL5Q8N475 847 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 GPRC5AQ8NFJ5 357 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 BIRC7Q96CA5 298 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 COQ8BQ96D53 544 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 DIRAS2Q96HU8 199 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FBXL20Q96IG2 436 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 MCEEQ96PE7 176 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FERD3LQ96RJ6 166 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SRRQ9GZT4 340 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SHARPINQ9H0F6 387 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 OR51M1Q9H341 326 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 OPA3Q9H6K4 179 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ACP6Q9NPH0 428 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 KMT5AQ9NQR1 393 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SLC39A10Q9ULF5 831 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 PLCL2Q9UPR0 1127 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 CORO2BQ9UQ03 480 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ENTPD4Q9Y227 616 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 MSRB2Q9Y3D2 182 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 MYOCOSA0A1B0GUC4 107 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF670-ZNF695F2Z2N8 137 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 L7N2F9 121 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 MASP2O00187 686 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 MAFKO60675 156 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 EEDO75530 441 aaKnown RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 AQP8O94778 261 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 AP2A1O95782 977 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 HLA-DPB1P04440 258 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 LCKP06239 509 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 GNAO1P09471 354 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ADORA3P0DMS8 318 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ARAFP10398 606 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ARSBP15848 533 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SPI1P17947 270 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 MPSTP25325 297 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 TNFSF8P32971 234 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 CLCN3P51790 818 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 GP2P55259 537 aaKnown RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 CRADDP78560 199 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 CAMK2GQ13555 558 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 C9orf57Q5W0N0 161 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ANKRD54Q6NXT1 300 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FDX2Q6P4F2 183 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 TEX261Q6UWH6 196 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SLC24A5Q71RS6 500 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FAM129CQ86XR2 697 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 TRIM48Q8IWZ4 208 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FBXO30Q8TB52 745 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 PTERQ96BW5 349 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 FAM120BQ96EK7 910 aaKnown RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 TRNT1Q96Q11 434 aaKnown RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 ASPNQ9BXN1 380 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 DPAGT1Q9H3H5 408 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 CACYBPQ9HB71 228 aaKnown RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 GPN1Q9HCN4 374 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 C1orf109Q9NX04 203 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SH3BP4Q9P0V3 963 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 KLHL8Q9P2G9 620 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-204ENST00000503468 U3KQ87 197 aa2.65□□□□□ -1.98
NEDD4-204ENST00000503468 SPTBN5Q9NRC6 3674 aaKnown RBP2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms