RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PRAMEF10O60809 474 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 GCM2O75603 506 aaPredicted RBP20.79■□□□□ 0.92
PTPN13-205ENST00000502971 IFNA14P01570 189 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 ALOX12P18054 663 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 CSNK2A2P19784 350 aaPredicted RBP20.79■□□□□ 0.92
PTPN13-205ENST00000502971 CDH3P22223 829 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 CLCN2P51788 898 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 TNFRSF17Q02223 184 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 SPIDRQ14159 915 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 TMEM154Q6P9G4 183 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 CEACAM20Q6UY09 585 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 DGLUCYQ7Z3D6 616 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 GALNT10Q86SR1 603 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 ZC3H7AQ8IWR0 971 aaKnown RBP20.79■□□□□ 0.92
PTPN13-205ENST00000502971 OR10Q1Q8NGQ4 319 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 CNRIP1Q96F85 164 aaPredicted RBP20.79■□□□□ 0.92
PTPN13-205ENST00000502971 CNBD2Q96M20 576 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 DOHHQ9BU89 302 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 A4GALTQ9NPC4 353 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 DNAAF2Q9NVR5 837 aaKnown RBP20.79■□□□□ 0.92
PTPN13-205ENST00000502971 THUMPD1Q9NXG2 353 aaKnown RBP20.79■□□□□ 0.92
PTPN13-205ENST00000502971 KCMF1Q9P0J7 381 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 ZNF780BQ9Y6R6 833 aa20.79■□□□□ 0.92
PTPN13-205ENST00000502971 TP53BP1Q12888 1972 aaPredicted RBP20.79■□□□□ 0.92
PTPN13-205ENST00000502971 WASHC1A8K0Z3 465 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 G3V2T6 193 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 PIAS2O75928 621 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 FABP3P05413 133 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 PROS1P07225 676 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 ST6GAL1P15907 406 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CPN2P22792 545 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CAPZBP47756 277 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 RXRGP48443 463 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CHN2P52757 468 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CRYBA2P53672 197 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 SELENOWP63302 87 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 DEFB134Q4QY38 66 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 ZC3H12BQ5HYM0 836 aaKnown RBP20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CRB2Q5IJ48 1285 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 PIWIL3Q7Z3Z3 882 aaKnown RBP20.78■□□□□ 0.92
PTPN13-205ENST00000502971 C1orf210Q8IVY1 113 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CHERPQ8IWX8 916 aaKnown RBP20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CSNK1A1LQ8N752 337 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 OR5K1Q8NHB7 308 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 SFXN5Q8TD22 340 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 MAGEE2Q8TD90 523 aaPredicted RBP20.78■□□□□ 0.92
PTPN13-205ENST00000502971 TFAP2CQ92754 450 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 MOAP1Q96BY2 351 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 TRAPPC9Q96Q05 1148 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 LYRM4Q9HD34 91 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 SMPD3Q9NY59 655 aaPredicted RBP20.78■□□□□ 0.92
PTPN13-205ENST00000502971 UBAP1Q9NZ09 502 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 SH3BP5O60239 455 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 B4GALT2O60909 372 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 HPRP00739 348 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 EIF2S1P05198 315 aaKnown RBP20.78■□□□□ 0.92
PTPN13-205ENST00000502971 AQP1P29972 269 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 MPIP34949 423 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 ALDH3A2P51648 485 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 ARSFP54793 590 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 LIM2P55344 173 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 DEFB133Q30KQ1 61 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 C14orf28Q4W4Y0 310 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 BHLHB9Q6PI77 547 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 TBPL2Q6SJ96 375 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 VTCN1Q7Z7D3 282 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 SAMD14Q8IZD0 417 aaPredicted RBP20.78■□□□□ 0.92
PTPN13-205ENST00000502971 HORMAD2Q8N7B1 307 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 C19orf47Q8N9M1 422 aaKnown RBP20.78■□□□□ 0.92
PTPN13-205ENST00000502971 SUN3Q8TAQ9 357 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 KLHL6Q8WZ60 621 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 TPD52L3Q96J77 140 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CCDC3Q9BQI4 270 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 ERVMER34-1Q9H9K5 563 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 BAG5Q9UL15 447 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 DAPP1Q9UN19 280 aa20.78■□□□□ 0.92
PTPN13-205ENST00000502971 CUL9Q8IWT3 2517 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 TLX1P31314 330 aaPredicted RBP20.77■□□□□ 0.92
PTPN13-205ENST00000502971 PCBP3P57721 371 aaKnown RBP20.77■□□□□ 0.92
PTPN13-205ENST00000502971 MERTKQ12866 999 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 RUNX2Q13950 521 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 DAG1Q14118 895 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 REEP3Q6NUK4 255 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 PATL1Q86TB9 770 aaKnown RBP20.77■□□□□ 0.92
PTPN13-205ENST00000502971 CARM1Q86X55 608 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 CCDC116Q8IYX3 515 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 ZNF681Q96N22 645 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 ANKRD60Q9BZ19 345 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 SLC22A7Q9Y694 548 aa20.77■□□□□ 0.92
PTPN13-205ENST00000502971 EIF4E1BA6NMX2 242 aaKnown RBP20.76■□□□□ 0.91
PTPN13-205ENST00000502971 VSX2P58304 361 aaPredicted RBP20.76■□□□□ 0.91
PTPN13-205ENST00000502971 SNRPNP63162 240 aaKnown RBP20.76■□□□□ 0.91
PTPN13-205ENST00000502971 KCNJ10P78508 379 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 TP53BP2Q13625 1128 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 OR2T5Q6IEZ7 315 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 OR52E8Q6IFG1 317 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 STK32CQ86UX6 486 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 OR2T29Q8NH02 315 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 LZICQ8WZA0 190 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 SLC35G5Q96KT7 338 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms