RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 FCGR1AP12314 374 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 PSMA4P25789 261 aaKnown RBP8.56□□□□□ -1.04
NR1I3-216ENST00000502848 SLC7A1P30825 629 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 PCGF2P35227 344 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 ALDH9A1P49189 494 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 MVDP53602 400 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 HSD17B7P56937 341 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 IGLV3-21P80748 117 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-216ENST00000502848 PRR5P85299 388 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 DAB2P98082 770 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 MS4A2Q01362 244 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 CFHR1Q03591 330 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 SLC34A1Q06495 639 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 GAB1Q13480 694 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 SPIDRQ14159 915 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 RCN1Q15293 331 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 RGNQ15493 299 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 CYP51A1Q16850 503 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 VMACQ2NL98 169 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 INTS11Q5TA45 600 aaKnown RBP8.56□□□□□ -1.04
NR1I3-216ENST00000502848 PRAMEF8Q5VWM4 474 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 PRAMEF7Q5VXH5 474 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 ANKRD26P1Q6NSI1 321 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 PDSS2Q86YH6 399 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 CA13Q8N1Q1 262 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 EID2Q8N6I1 236 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 C11orf65Q8NCR3 313 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 OR10A6Q8NH74 314 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 ZCCHC10Q8TBK6 192 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 IFI44Q8TCB0 444 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 ZNF675Q8TD23 568 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 SLC26A7Q8TE54 656 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 NCLNQ969V3 563 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 RSRC1Q96IZ7 334 aaKnown RBP8.56□□□□□ -1.04
NR1I3-216ENST00000502848 NSMCE2Q96MF7 247 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 ZNF578Q96N58 590 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-216ENST00000502848 BBS4Q96RK4 519 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 MAPKAP1Q9BPZ7 522 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 SLC35A5Q9BS91 424 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 TRIM4Q9C037 500 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 ZMYND15Q9H091 742 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 ARRDC1-AS1Q9H2J1 176 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 VCX3BQ9H321 246 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 MAGIXQ9H6Y5 334 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 YY1AP1Q9H869 796 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 C3orf14Q9HBI5 128 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 C11orf16Q9NQ32 467 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 SLC6A13Q9NSD5 602 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 GMEB2Q9UKD1 530 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 FBXW2Q9UKT8 454 aa8.56□□□□□ -1.04
NR1I3-216ENST00000502848 RNF103-CHMP3A0A140T963 221 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 A0A1W2PQM1 296 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 DHRS12A0PJE2 317 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 LNP1A1A4G5 178 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 CPED1A4D0V7 1026 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 TTC36A6NLP5 189 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 D6RAR5 112 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 TMX2-CTNND1H3BSU7 103 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 CLDN4O14493 209 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 DSCR3O14972 297 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 ZNF749O43361 778 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 HNRNPRO43390 633 aaKnown RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 FOXS1O43638 330 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 TNFRSF21O75509 655 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 OR2B3O76000 313 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 KCNK5O95279 499 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 CPSF4O95639 269 aaKnown RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 GPR75O95800 540 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 ONECUT2O95948 504 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 EIF2S1P05198 315 aaKnown RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 RPLP0P05388 317 aaKnown RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 CDK4P11802 303 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 PORP16435 677 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 TCN1P20061 433 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 CHI3L1P36222 383 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 PPM1FP49593 454 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 OR4D2P58180 307 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 RUNX2Q13950 521 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 SELPLGQ14242 412 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 GNA13Q14344 377 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 IL11RAQ14626 422 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 AMZ1Q400G9 498 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 GTDC1Q4AE62 458 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 PERM1Q5SV97 790 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 NKAIN2Q5VXU1 208 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 GLYATQ6IB77 296 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 DNAJC14Q6Y2X3 702 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 CCDC80Q76M96 950 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 SLITRK4Q8IW52 837 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 DTWD1Q8N5C7 304 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 RNF148Q8N7C7 305 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 AMER3Q8N944 861 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 Q8N9G6 341 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 SUMF1Q8NBK3 374 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 SUN3Q8TAQ9 357 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 NUDT8Q8WV74 236 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 PMM1Q92871 262 aa8.55□□□□□ -1.04
NR1I3-216ENST00000502848 CIDECQ96AQ7 238 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-216ENST00000502848 EXOSC8Q96B26 276 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms