RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GPX3P22352 226 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 HLA-FP30511 346 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 MTTPP55157 894 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 XGP55808 180 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 DRP2Q13474 957 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 SNX1Q13596 522 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 EXOSC7Q15024 291 aaKnown RBP4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 EFTUD2Q15029 972 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 TAB1Q15750 504 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF718Q3SXZ3 478 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 ANKDD1AQ495B1 522 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 SPANXN4Q5MJ08 99 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 LDLRAP1Q5SW96 308 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 IL23RQ5VWK5 629 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 CES4AQ5XG92 561 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 RTL6Q6ICC9 239 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 ARSKQ6UWY0 536 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 SMIM29Q86T20 159 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 YRDCQ86U90 279 aaKnown RBP4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 AMZ2Q86W34 360 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 C17orf64Q86WR6 236 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 CACUL1Q86Y37 369 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 Q8N9P0 234 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 TMEM178AQ8NBL3 297 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 MINDY2Q8NBR6 621 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 OR10V1Q8NGI7 309 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 OR52B4Q8NGK2 314 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 C8orf46Q8TAG6 207 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 WWP1Q9H0M0 922 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 FNDC4Q9H6D8 234 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 C3orf14Q9HBI5 128 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF71Q9NQZ8 489 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 TECRQ9NZ01 308 aaKnown RBP4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 ERVK-18Q9QC07 812 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 PLCL2Q9UPR0 1127 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 KIF3AQ9Y496 699 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 C3P01024 1663 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 CASKIN1Q8WXD9 1431 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF518AQ6AHZ1 1483 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 IGHV4-4A0A075B6R2 117 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 hCG_38984A0A1B0GV85 526 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 BMPR1BO00238 502 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 IKBKBO14920 756 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 ADAM12O43184 909 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 KRT86O43790 486 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 LRCH4O75427 683 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 IGHDP01880 384 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 GLRA1P23415 457 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 GIFP27352 417 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 ACADSBP45954 432 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 SLC6A8P48029 635 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 LEPRP48357 1165 aaKnown RBP4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 LIMK2P53671 638 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 BACE1P56817 501 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 LINC01547P58512 204 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 PHEXP78562 749 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 MYBPC1Q00872 1141 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 FHL1Q13642 323 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 KRT81Q14533 505 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 CDC42EP5Q6NZY7 148 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 MEX3BQ6ZN04 569 aaKnown RBP4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 Q6ZVQ6 151 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 LSMEM2Q8N112 164 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 COLGALT1Q8NBJ5 622 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 TRIM58Q8NG06 486 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 OR5T2Q8NGG2 359 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 SELENOMQ8WWX9 145 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 PHYHIPQ92561 330 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 TMEM45BQ96B21 275 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 TRIM44Q96DX7 344 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 FUCA2Q9BTY2 467 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 PAPOLGQ9BWT3 736 aaKnown RBP4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 ROPN1Q9HAT0 212 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 VAT1LQ9HCJ6 419 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 SLC52A3Q9NQ40 469 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 MGAT4BQ9UQ53 548 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 SUPT6HQ7KZ85 1726 aaKnown RBP4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 CLIP1P30622 1438 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 C9orf84Q5VXU9 1444 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 CCDC18Q5T9S5 1454 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 ABCC1P33527 1531 aa4.62□□□□□ -1.67
HMGB1P3-201ENST00000502802 REREQ9P2R6 1566 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 A0A087WZY1 265 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 ARPC1BO15143 372 aaKnown RBP4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 B4GAT1O43505 415 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 PCDH7O60245 1069 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 KRT6BP04259 564 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 LYNP07948 512 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 HMBSP08397 361 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZCCHC18P0CG32 403 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 HSPA5P11021 654 aaKnown RBP4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 KRT6CP48668 564 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 HSPA2P54652 639 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 DLX5P56178 289 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 PMP22Q01453 160 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 GUCY2DQ02846 1103 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 NME3Q13232 169 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 BTG3Q14201 252 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 AGKQ53H12 422 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 RIPPLY2Q5TAB7 128 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms